Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2195 ATGGCAATGGAAACAGTGATAGATCTGTATAATAATAGTAGCAACATCACAGAAGAACTCATGAAGGCACTTGAGCCTTTTATGAGTGGTGATTCTGATTCATCTATCGCTTCTTTAACCTCTTTTTCTCTTTCTTCTCCTCCTTCTTTGACGACATGGAACAACACCCAAGGTAGTTCCATAAGATTGAACCAACTCACACCATCTCAAATTCATCAGATTCAAGCTGAAATTACGTTGAAGAACCAAAATAATAACGTGTTTCTTAGCCCAAAACCTGTTCCAATGAAGCATCCTGCAAAACCCGCAAAGCTTTACCGTGGGGTGAGACAAAGGCATTGGGGAAAGTGGGTGGCTGAGATAAGACTCCCAAAGAATCGTACCCGTCTTTGGTTGGGTACTTTTGATAGCGCTGAAGATGCAGCTTTGGCATATGACAACGCAGCGTATAAGCTAAGGGGTGAACATGCAAGGCTTAATTTTCCTCATCTACGTCACCATGGAGCTCTTCCCTCATCCGTGGATGCAAAGCTTCAAGCTATTGTTAACTCTCAGGTGAAAGCAGAAAAGCCTTGTTCTGCTAACGTTGTTGTTAAGGCAGAAACATCAGAGTTGGAGAACCAAACATCAGATGAATATTCTGCGAGTTCCTCTTCTCCTGAGTCTGATATTAATTTTATGGATTTCTCGGGTTCTTGTGAAATAGATAATCTTGGATTGGACTTGGAAAAGTACCCTTCGGTGGAGATTGATTGGGCAGCTATATGA 768 0.4193 MAMETVIDLYNNSSNITEELMKALEPFMSGDSDSSIASLTSFSLSSPPSLTTWNNTQGSSIRLNQLTPSQIHQIQAEITLKNQNNNVFLSPKPVPMKHPAKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDSAEDAALAYDNAAYKLRGEHARLNFPHLRHHGALPSSVDAKLQAIVNSQVKAEKPCSANVVVKAETSELENQTSDEYSASSSSPESDINFMDFSGSCEIDNLGLDLEKYPSVEIDWAAI* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2195 255 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 3 255 - -
Apr10g2195 255 SUPERFAMILY DNA-binding domain 105 163 IPR016177 GO:0003677
Apr10g2195 255 ProSiteProfiles AP2/ERF domain profile. 105 162 IPR001471 GO:0003700|GO:0006355
Apr10g2195 255 Gene3D AP2/ERF domain 105 163 IPR036955 GO:0003700|GO:0006355
Apr10g2195 255 CDD AP2 104 164 IPR001471 GO:0003700|GO:0006355
Apr10g2195 255 PRINTS Ethylene responsive element binding protein signature 106 117 IPR001471 GO:0003700|GO:0006355
Apr10g2195 255 PRINTS Ethylene responsive element binding protein signature 128 144 IPR001471 GO:0003700|GO:0006355
Apr10g2195 255 SMART rav1_2 105 168 IPR001471 GO:0003700|GO:0006355
Apr10g2195 255 MobiDBLite consensus disorder prediction 203 222 - -
Apr10g2195 255 Pfam AP2 domain 106 155 IPR001471 GO:0003700|GO:0006355
Apr10g2195 255 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2195 Apr-Chr10 34396606 34397700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2195 6 255 AP2-EREBP Transcription Factor Family AT4G39780 53.381 1.34e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr10g2195 AP2 4.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2195 K09286 - gmx:106796800 269.626