Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2189 ATGGTTGCTTCAAACAAATCCACAGTGAACACTGCAATATTTGAAGAGGTTCTTGACATTGAGAAGAATGGGAAGGAGAAGAGAGCTGAGTGGGTGCTGAATCCTCCAGAACCACCATGCATGCTGCGTCAGGTGTTGGACAACATCAAAGACACCCTCTTACCTCGTCCAAATCGAAACCTATTCTTTTCTCTCCCAAATCAACCTTTTTCCAAACGCGTCTTTGCCTTGTTGCAGCACCTGTTTCCTATCCTACGTTCATTCCATAATTACAATGCCCAAAAATTCAAGTGCGATTTCATGGCCGGTCTAACCCTTGCAATTTTCGCCATTCCTCAGTGTATGGGAAATGCGACACTAGCGCAGCTAAGTCCTGAATATGGCCTCTATACAGGTATTGTGCCACCTCTTATTTACGCTATGCTGGCGAGTTCAAGGGAGATAGTGATCGGGCCTGTAGCTGTGGATTCATTGCTTCTTTCCTCAATGATTCACACATTGAAAGATCCTATTCATGATTCTATTACTTACACTCAGCTTGTTCTCACTGCAACATTTTTTGCGGGTATCTTTCAAGTTGCTTTCGGACTCTTTAGGCTAGGTTTCCTAGTGGATTATCTTTCCCATGCCACGATCCTGGGGTTCTTGGCAGCAGCTGCCCTGGGCATTGGATTACAACAATTAAAAGGGTTATTTGGGATCGTTAAGTTTACCAACAAAACTGGTTTAATTGAAGTAATGAAAGCTGTTTGGACATCGTTCAAAAACCAATCAGAGTGGCATCCTTACAATTTTATTATTGGATTCTCATTTCTCTGTTTCATCCTATTTACCAGATTCCTGGGGAGAAGGAACAGGAAACTCTTCTGGTTGTCACATGTTGCTCCTCTCCTTTCTGTCATTGTATCCTCTGTTATTGCATACAGAATAAATTTTCATGAGCTTAAAGTGAAGGACTATAGAGTTGAAGTCTTGGGACCAATCAAAGGAGGTAGCTTGAATCCATTGTCATTCAACCAGTTAATATTCAAAGGCAAAGTTGTGGCTCCTTTGATCAAAATAGGGTTGACCGTTGCTATTATTTCACTCACGGGATCTATTGCTGTTGGGCGATCATTTGCAGCCCTTAGAGGATACAATCTGAATCCCAACAGAGAAGTGGTATCATTGGGCATAATGAACATTGTTGGATCCTTCACTTCTTGCTATATTGCATCAGGTTCAGTGGCACGAACTGCTGTAAACTATAATGCAGGATCAGAAACATTGGTGTCGAACATAGTGATGGCACTGACGGTTCTGATGTCACTCAAGTTTTTGACAGGGCTCTTATATTTCACTCCAAAAGCAATCTTAGCAGCAATAATTCTATCGGCTATACCAGGACTCATTGACCTTAACAAAGCATATCAAATTTGGAAGGTTGATAAAACCGATTTCCTTGCCTGCGCAGGAGCTTTCTTCGGTGTCTTGTTTGCATCCGTCGAATTTGGCCTTGCAATTGGGATCACGATATCGTTTGCGAAGATAATTATAATCTCAATTCAACCTGGTATAGCGCTTGTTGGAAGGCTTCCTGAAACTGATGCATTTGGTGACGTTGAACAATATCCAATGGCGGTCAACGTTCCTGGAGTTTTGATAGTTTCTCTAAAATCTTCTTGGCTTTGTTTTGCAAATGCAAGTCTTGTCAGGGAAAGGATTGGGAGATGGGTGACCAACGAAGAAGGCAAGGATGGCAAAGGGGAAATCACCTTCAAACACGTCATTATTGATGCCTCAAGTCTCACGAATATTGACACCGCGGGAATTGCTTCTTTGGTCGAGCTGAATAAAATTCTCACTTCACATGGAGTCAAATTAGCTATGGCTAACCCTAGGTGGCACGTAATTCACAAGCTAAGATTAGCTAACTTCGTGAGCGAAATTGGAGGAAGGGTTTTTCTGTCTGTGGAAGAAGCTGTAGACGCATGTTGTCAGATGGTTACTAAAATGGTTACTTTATAA 2007 0.4205 MVASNKSTVNTAIFEEVLDIEKNGKEKRAEWVLNPPEPPCMLRQVLDNIKDTLLPRPNRNLFFSLPNQPFSKRVFALLQHLFPILRSFHNYNAQKFKCDFMAGLTLAIFAIPQCMGNATLAQLSPEYGLYTGIVPPLIYAMLASSREIVIGPVAVDSLLLSSMIHTLKDPIHDSITYTQLVLTATFFAGIFQVAFGLFRLGFLVDYLSHATILGFLAAAALGIGLQQLKGLFGIVKFTNKTGLIEVMKAVWTSFKNQSEWHPYNFIIGFSFLCFILFTRFLGRRNRKLFWLSHVAPLLSVIVSSVIAYRINFHELKVKDYRVEVLGPIKGGSLNPLSFNQLIFKGKVVAPLIKIGLTVAIISLTGSIAVGRSFAALRGYNLNPNREVVSLGIMNIVGSFTSCYIASGSVARTAVNYNAGSETLVSNIVMALTVLMSLKFLTGLLYFTPKAILAAIILSAIPGLIDLNKAYQIWKVDKTDFLACAGAFFGVLFASVEFGLAIGITISFAKIIIISIQPGIALVGRLPETDAFGDVEQYPMAVNVPGVLIVSLKSSWLCFANASLVRERIGRWVTNEEGKDGKGEITFKHVIIDASSLTNIDTAGIASLVELNKILTSHGVKLAMANPRWHVIHKLRLANFVSEIGGRVFLSVEEAVDACCQMVTKMVTL* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2189 668 Gene3D STAS domain 516 661 IPR036513 -
Apr10g2189 668 ProSiteProfiles STAS domain profile. 556 658 IPR002645 -
Apr10g2189 668 Pfam Sulfate permease family 96 484 IPR011547 GO:0016021
Apr10g2189 668 SUPERFAMILY SpoIIaa-like 543 658 IPR036513 -
Apr10g2189 668 Pfam STAS domain 537 654 IPR002645 -
Apr10g2189 668 PANTHER EARLY NODULIN-70 20 667 - -
Apr10g2189 668 CDD STAS_SulP_like_sulfate_transporter 537 649 - -
Apr10g2189 668 TIGRFAM sulP: sulfate permease 83 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Apr10g2189 668 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Apr10g2189 668 PANTHER SULFATE TRANSPORTER 20 667 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2189 Apr-Chr10 34345987 34350141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2189 25 658 Inorganic Solute Cotransporters AT5G10180 55.086 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2189 K17469 - gmx:100817841 1020.76