Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2188 ATGGCTTCTTCAATGATGGAGACCAGCAAATCGCAGGAGGACATTGAGAAGAAGTCGCATGATGTAAGGTCTGAATGGGTTCTTAATGCTCCTCAGCCCCCAAGTCCCTACCGTGTGGTTGCAGATTCTCTCAGTAAAACCATTTCCCAGTGTCAAAGAAGCTTTTCCTCTCTCAGAGATCAACCCTTCACCACACTCCTGCTTTCAGTTTTGCAAGTCATTTTTCCTATTCTTGCATGGGGCAGAAACTACACTGCTTCTAAATTCAGGAAAGATCTTCTTGCAGGCCTTACTATTGCAAGTCTCTGTATTCCCCAGAGCATTGGGTATGCGACTTTAGCACACCTTGATCCTCAATATGGCCTTTACACAAGTGTTGTACCACCGCTTATCTATGCTGTAATGGGAACTTCTAGAGAGATAGCAATTGGTCCTGTGGCTGTGGTTTCTCTGCTGTTATCATCAATGATCCAGAAATTAACAGACCCTGCTGTTGATCCAGTGGGATATACAAAGCTGGTTTTGCTTGCTACACTCTTTGCTGGAATCTTTCAAACTTCGTTCGGAGTTTTCAGGCTGGGGTTCCTTGTGGATTTCCTATCCCATGCTGCGATAGTTGGATTTGTGGGAGGAGCAGCCATTGTGATTGGGCTTCAACAGTTGAAGGGACTGTTTGGAATCACTCATTTTACGACCAAAACCGACATAATCTCTGTCTTGAAAGCGGTTTGGGAAGCAGTTCACAATCCCTGGAACCCGCGTAACTTTATCCTCGGAACTTCTTTCTTGATCTTCATCTTAACAACTAGATTTCTGGGTAAAAGGAAGAAGTTGTTCTGGTTGGCATCAATTTCTCCTCTTGTATCTGTTGTATTGTCAACTTTAGCTGTTTTTCTGACAAGAGCTGATAAAAATGGAGTTAAAATAGTGAAACATGTCAAAGGAGGATTGAATCCAAGCTCCATCCATCAATTAGACTTCAACAACCCTTACATTGGAGAAGTGGCCAAAATTGGACTAGTGGTTGCTGTCGTCGCCCTAACTGAATCTGTTGCTGTTGGACGATCTTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAGGAGATGATGTCAATAGGCGTCACAAACATCATAGGATCTTTCACCTCCTGTTATGTTGCAACTGGTTCGTTCTCCCGCACCGCTGTGAATTATGCGGCTGGCTGTGAAACTTTAGTGTCAAACATTGTGATGGCTGTGACGGTGTTGATATCATTGCAGTTTTTGACAAAGCTTTTATATTATACACCAACCGCTATTCTTGCTTCTGTCATTCTCTCTGCTCTCCCAGGACTCATTGACGTCACTGAAGCTTACAAAATTTGGAAGGTTGACAAGTTAGACTTTCTTGCTTGCACTGGAGCCTTCTTTGGGGTACTATTTGCTTCTGTGGAGATTGGTCTTCTAGTGGCGGTGGTAATATCTTTTTCGAAGATCATTCTCATCTCAATTCGACCTGGCACAGAAACTCTAGGAAAACTTCCGGGAACTGATTTGTTCTGCGATGTTTATCAGTATCCAATGGCAGTTAAGATTCCCGGGGTTATGATAATTCGTGTCAAGTCTGCGTTACTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGGATAATCAAATGGGTCGCTGAGGAAGAATCGGAAGATGATGACAAGGGAAATTCAAAAAGCACCATTCAACTCGTAATTATTGACACCTCCAATTTGGTGAACATTGACACTTCCGGAATTGCTGCTCTAGAGGACCTGCATAAAAGTTTGTCTTCACATGGGAAGCAGTTAGCCATTGCCAACCCTAGGTGGCAAGTGATACACAAGCTAAAGGTGTCCAACTTTGTTGACAAAATTGGTGGGAGAGTCTTTCTGACTGTTGAAGAAGCTGTTGGCTGCAAGAGCGAGTGCCAAGTTTGA 1953 0.4322 MASSMMETSKSQEDIEKKSHDVRSEWVLNAPQPPSPYRVVADSLSKTISQCQRSFSSLRDQPFTTLLLSVLQVIFPILAWGRNYTASKFRKDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMIQKLTDPAVDPVGYTKLVLLATLFAGIFQTSFGVFRLGFLVDFLSHAAIVGFVGGAAIVIGLQQLKGLFGITHFTTKTDIISVLKAVWEAVHNPWNPRNFILGTSFLIFILTTRFLGKRKKLFWLASISPLVSVVLSTLAVFLTRADKNGVKIVKHVKGGLNPSSIHQLDFNNPYIGEVAKIGLVVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGVTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAVTVLISLQFLTKLLYYTPTAILASVILSALPGLIDVTEAYKIWKVDKLDFLACTGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTDLFCDVYQYPMAVKIPGVMIIRVKSALLCFANANFVRERIIKWVAEEESEDDDKGNSKSTIQLVIIDTSNLVNIDTSGIAALEDLHKSLSSHGKQLAIANPRWQVIHKLKVSNFVDKIGGRVFLTVEEAVGCKSECQV* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2188 650 Gene3D STAS domain 500 647 IPR036513 -
Apr10g2188 650 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271|GO:0008272
Apr10g2188 650 MobiDBLite consensus disorder prediction 1 20 - -
Apr10g2188 650 CDD STAS_SulP_like_sulfate_transporter 521 636 - -
Apr10g2188 650 ProSiteProfiles STAS domain profile. 540 645 IPR002645 -
Apr10g2188 650 Pfam Sulfate permease family 89 468 IPR011547 GO:0016021
Apr10g2188 650 PANTHER SULFATE TRANSPORTER 2.1 56 645 - -
Apr10g2188 650 SUPERFAMILY SpoIIaa-like 525 642 IPR036513 -
Apr10g2188 650 TIGRFAM sulP: sulfate permease 76 638 IPR001902 GO:0015301|GO:0016020|GO:0055085
Apr10g2188 650 Pfam STAS domain 521 641 IPR002645 -
Apr10g2188 650 PANTHER SULFATE TRANSPORTER 56 645 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2188 Apr-Chr10 34335780 34342211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2188 4 642 Inorganic Solute Cotransporters AT5G10180 67.812 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2188 K17469 - gmx:100781327 1144.41