Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2165 ATGGTTTCTAGAGAGCAAAAGAGAGCTGCACTGCATGAGAAGCTTCAACTTCTTCGTTCTATTACCAACTCTCATGCTCTAAACAAAACCTCGATCATAATTGATGCATCAAAGTATATCGAAGAACTAAAGCAAAAAGTAGAACGACTGAATCAAGACATAGCCAATGCACAAACTTCAAATGACCAAAATTCTTTTCCTATGGTTACAGTAGAAACCCTAGAAAAGGGTTTTCTTATAAATGTTTTTTCAACAAAGAGCTGCCCGGGCCTGCTTGTTTCCATATTGGAGACCTTTGAAGAGATGGGTCTTAATGTGCTTGAAGCTAGGGTTACTTGTTCGGACACTTTTCGATTTCAAGCTGTTGGAGGAGAAAATGAAGAGCGTATTGATGCTCAAGCTGTGAAACAGGCAATGGGACAAGCAATAAAGAATTGGAGCGAAAGTTATACTGATCAAAAGTAA 465 0.3871 MVSREQKRAALHEKLQLLRSITNSHALNKTSIIIDASKYIEELKQKVERLNQDIANAQTSNDQNSFPMVTVETLEKGFLINVFSTKSCPGLLVSILETFEEMGLNVLEARVTCSDTFRFQAVGGENEERIDAQAVKQAMGQAIKNWSESYTDQK* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2165 154 CDD ACT_UUR-ACR-like 89 143 - -
Apr10g2165 154 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 63 IPR036638 GO:0046983
Apr10g2165 154 PANTHER TRANSCRIPTION FACTOR SCREAM-LIKE PROTEIN 1 150 - -
Apr10g2165 154 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 150 - -
Apr10g2165 154 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2165 Apr-Chr10 34169066 34170481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2165 11 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.167 1.71e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2165 - - gmx:100814138 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1474 9 24314397 24315859 Apr10g2165 10 34169066 34170481 ECH
Apr4g2116 4 30169893 30172058 Apr10g2165 10 34169066 34170481 ECH
Apr10g0823 10 20423980 20425370 Apr10g2165 10 34169066 34170481 ECH
Apr10g2165 10 34169066 34170481 Apr10g2165 10 34169066 34170481 ECH
Apr10g2165 10 34169066 34170481 Apr9g1474 9 24314397 24315859 PCT