Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2163 ATGTCTCCGGCAGCCGGAATCCACGTCCCCCTCTTGCCGGAATCCAGAGCACCGGCAACGCCAGCGTCTGTCCCCGGCGCCGTGGTCAATGTGGCGACCAGCATAATCGGCGCCGGAATCATGTCAATCCCGGCGATCATGAAGGTTCTCGGTGTGTTTCCCGCTATAGCCATGATTCTCGTAGTGGCGGTGCTTGCCGAAGTTTCCGTTGACTTCCTCATGCGGTTTACTCACACCGGCGAAACGACGACGTACGCCGGCGTCATGAGGGAAGCGTTCGGGCCACCGGGAGCGCTAGCTGCGCAAATCTGTGTCATAATCACCAACGTTGGGGGTTTAATTCTCTACCTTATTATCATTGCGGATGTGCTCTCCGGAAAGCATGATGGAGATGAAGTGCATCTGGGCATTTTGCAACAGTGGTTTGGAATTCAGTGGTGGAATTCCCGGGAAATTGCTTTGCTCTTCACCTTGGTCTTTGTTATGCTTCCATTGGTCTTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCAGTGGCTTTTGTTGGCATATGTTGTGGCTTGGCTATCGCTGCTCTGGTGCAAGGAAAAACACAAACTCCTAGATTGTTTCCTCAGTTTGACTACCAAACCTCCTTCTTTGATCTGTTCACTACTGTCCCTGTTGTTGTCACGGCTTTCACATTTCATTTTAATGTGCATCCCATTGGGTTTGAGCTTGGCAAGCCATCCGACATGACAACAGCTGTTCGATTAGCATTATTGCTTTGTGCTGTTATCTACCTTACAATAGGTCTATTTGGTTACCTGTTATTTGGGGATTCAACTCAATCAGACATTCTCATCAATTTTGACCAGAGTGATGATTCCGTGGTTGGTTCCTTGTTCAATAGTTTGGTCCGTGTAAGTTATGCACTCCACATCATGCTGGTGTTCCCCCTCGTGAACTTCTCTTTGAGAGCCAACATAGATGAAGTTCTCTTCCCCAAGAAGCCTCTGCTAGCCACAGACAACAAAAGATTTGTGATCCTCTCTTTGGTGCTGCTAGTCTTCTCTTACCTTGCTGCTATTACAATCCCAGACATTTGGTACTTCTTTCAGTTTCTGGGATCAACATCTGCAGTGTGCCTTGCCTTCATTTTCCCTGGCTGCATTGTTTTAAGGGATGCTCATGGTATATCAACGAGAAGGGACAAAATTATAGCACTGATTATGATTATACTAGCTGTGGTGACAAGTGTTATAGCCATTTCCACCAACATATTTAATGCTTTTAGTAGCAAGTCATAA 1311 0.4683 MSPAAGIHVPLLPESRAPATPASVPGAVVNVATSIIGAGIMSIPAIMKVLGVFPAIAMILVVAVLAEVSVDFLMRFTHTGETTTYAGVMREAFGPPGALAAQICVIITNVGGLILYLIIIADVLSGKHDGDEVHLGILQQWFGIQWWNSREIALLFTLVFVMLPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAIAALVQGKTQTPRLFPQFDYQTSFFDLFTTVPVVVTAFTFHFNVHPIGFELGKPSDMTTAVRLALLLCAVIYLTIGLFGYLLFGDSTQSDILINFDQSDDSVVGSLFNSLVRVSYALHIMLVFPLVNFSLRANIDEVLFPKKPLLATDNKRFVILSLVLLVFSYLAAITIPDIWYFFQFLGSTSAVCLAFIFPGCIVLRDAHGISTRRDKIIALIMIILAVVTSVIAISTNIFNAFSSKS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2163 436 PANTHER AMINO ACID TRANSPORTER 3 434 - -
Apr10g2163 436 Pfam Transmembrane amino acid transporter protein 22 424 IPR013057 -
Apr10g2163 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2163 Apr-Chr10 34153895 34156618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2163 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.430 4.62e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2163 - - gmx:100813056 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2163 10 34153895 34156618 Apr10g2163 10 34153895 34156618 ECH
Apr10g2163 10 34153895 34156618 Apr9g1471 9 24279537 24282932 PCT
Apr9g1472 9 24287628 24290270 Apr10g2163 10 34153895 34156618 PCT