Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2152 ATGGTATTGAAGAAAAACAATCTCACTTCAAAATGCTTCCACCACGACCCTTGTCACATTTTGCAATCACATTGCCCCCATATTTCTGATAAGAAGAAAGAAAGATGGAAAATTCCACCCAAGACAGACAGCCCATGTTGTTTTTCCAGGTTGTTTCTCTTCTGTCTCCACTGTCTGTGGATTCTTCTGCTTTCCAACAGTGTGAAGCCAGTTTTGGGTGATGATGAGCGTTGGGATGGAGTGGTTGTGACAGAATCAAATTTCTTAGCACTTCAAGCATTTAAGCAAGAGTTGGTCGATCCCAAAGGCTTCTTGCGGAGCTGGAATGACTCTGGCTATGCAGCTTGTTCAGGAGGTTGGGTTGGTATCAAGTGTGCTCAGGGACAAGTTATTGTGATTCAGCTTCCATGGAAGGGGTTGAGTGGGCATATCACAGATAGGATTGGTCAACTTCAAGGTCTTAGAAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCATCTTTGGGACTTCTTCCCAATCTTAGAGGGGTTCAGTTATTCAACAATAGGTTAACAGGTTCCATCCCTCCTTCCTTAGGTTACTGCCCTTTGCTTCAGTCTCTTGATCTCAGTAACAATTTGCTCACTGGAACAATCCCTTATAGCCTTGCCAATTCCTCTAAGCTTTTTTGGCTTAACTTGAGTTTTAATTCCTTCTCTGGTCCTATACCAGCTAGCCTAACTCACTCAGTTTCTCTCACATTCCTTTCTCTTCAACACAATAATCTCACTGGCTCCATTCCTAACTCATGGGGTGGTAGCCTAAAAAATGGCTTCTCTCGGCTTCAAAGTTTGATCCTTGATCACAACTTTTTCACTGGAAATATTCCTGCTTCTTTGGGCAGCTTAAGGGAACTTAGTGAGATTTCCCTTGGTCATAACCAGTTTAGTGGAGCTATACCAAATGAAATAGGAACCCTTTCAAGGCTTAGGTCACTAGACATTTCTAATAATGCCTTGAATGGGAGCTTGCCTGCTACACTCTCTAATTTGTCCTCACTTACACTGCTGAATGCAGTGAACAACCTCCTTGACAATCAAATCCCAGAAACTTTAGGTAGATTAAGTAATCTTTCTGTTCTGATTTTGAGCAGAAACCAATTTACTGGTCACATTCCTTCAAGTATTGCACATATTTCCACGCTCAGGCAGCTTGATTTGTCACTGAATAACCTCAGCGGAGAAATTCCTGTCTCCTTTGAAAATGTAAGTAGTCTTAATTTCTTCAATGTTTCTTATAATAACCTCTCAGGTGCTGTTCCCACTCTACTTGCCAAGAAGTTCAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGATATAGCCCTTCAATCCCATGCCATTCTCCAGCTCCATCAGAAGGAGTCCTTGCTCCACCTCCTGAAGTGTCAAAACACCACCATCATAAGAAGCTAAGTACCAAAGACATAATTCTCATATTAGCAGGAGCTCTTCTCATAGTCCTGATTGCACTATGTTGCATTCTGCTCTTCTGCCTGATGAAAAAAAGAGCAAGATCAAAGGAGGAGAATGGCCGGGCCACAGGGAGAGGTGCCACAATGAGGAGGGAAAAAGGAGTCCCTCCTGTTGCTGAGGGTGAGGTTGAAGCAGGTGGGGAAGCTGGAGGGAAACTGGTACATTTTGATGGATCAATGGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCTGAGATAATGGGAAAAAGCACCTATGGAACTGTGTATAAGGCTACATTGGAGGATGGAAGTCAAGTTGCTGTCAAGAGATTGAGGGAAAAGATCACTAAAAGTCAGAGAGAATTTGAATCAGAAGTTAGTGTTCTAGGGAAAATTAGACACCCAAATCTTTTGGCTCTAAGGACTTATTACTTGGGACCCAAAGGAGAAAAGCTTCTTGTTTTCGATTACATGCCTAAAGGAAGTCTTGCTTCTTTCCTACATGCTCGTGGAACTGAAACAACCATAGATTGGACAACAAGGATGAAAATAGCACAGGACATGGCTCGTGGGTTGTTTTACCTTCATTCCCAAGAGAACATTATACATGGGAACCTTACATCAAGCAATGTGTTGCTTGATGAGAACACAAATGCTAAAATTGGAGATTTTGGTCTTTCTAGGTTGATGACACCTGCTGTTAACTCTAACGTGATAGCTACTGCTGGTGCATTGGGATACCGTGCACCTGAGCTCTCAAAGCTTAAGAAAGCCAACACAAAAACTGATATCTACAGTTTTGGAGTTATCTTGTTAGAACTCCTAACGAGGAAATCACCTGGGGTGTCTATGAATGGAGTAGATTTACCTCAGTGGGTTGCTTCTATTGTCAAAGAGGAGTGGACAAATGAGGTTTTTGATGCTGATTTGATGAGAGATGCATCAACAGTTGGTGATGAGTTGCTGAACACATTGAAGTTGGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGGCCAGATATTCAACAAGTGCTTCAGCAGCTAGAAGAGATTAGACCAGAGAGATCAGTCACAGCCAGTTCTGGCGATGATTCTAACGCCATATAG 2604 0.4243 MVLKKNNLTSKCFHHDPCHILQSHCPHISDKKKERWKIPPKTDSPCCFSRLFLFCLHCLWILLLSNSVKPVLGDDERWDGVVVTESNFLALQAFKQELVDPKGFLRSWNDSGYAACSGGWVGIKCAQGQVIVIQLPWKGLSGHITDRIGQLQGLRKLSLHDNQIGGSIPSSLGLLPNLRGVQLFNNRLTGSIPPSLGYCPLLQSLDLSNNLLTGTIPYSLANSSKLFWLNLSFNSFSGPIPASLTHSVSLTFLSLQHNNLTGSIPNSWGGSLKNGFSRLQSLILDHNFFTGNIPASLGSLRELSEISLGHNQFSGAIPNEIGTLSRLRSLDISNNALNGSLPATLSNLSSLTLLNAVNNLLDNQIPETLGRLSNLSVLILSRNQFTGHIPSSIAHISTLRQLDLSLNNLSGEIPVSFENVSSLNFFNVSYNNLSGAVPTLLAKKFNSSSFVGNIQLCGYSPSIPCHSPAPSEGVLAPPPEVSKHHHHKKLSTKDIILILAGALLIVLIALCCILLFCLMKKRARSKEENGRATGRGATMRREKGVPPVAEGEVEAGGEAGGKLVHFDGSMAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKSQREFESEVSVLGKIRHPNLLALRTYYLGPKGEKLLVFDYMPKGSLASFLHARGTETTIDWTTRMKIAQDMARGLFYLHSQENIIHGNLTSSNVLLDENTNAKIGDFGLSRLMTPAVNSNVIATAGALGYRAPELSKLKKANTKTDIYSFGVILLELLTRKSPGVSMNGVDLPQWVASIVKEEWTNEVFDADLMRDASTVGDELLNTLKLALHCVDPSPSARPDIQQVLQQLEEIRPERSVTASSGDDSNAI* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2152 867 Pfam Protein tyrosine and serine/threonine kinase 582 847 IPR001245 GO:0004672|GO:0006468
Apr10g2152 867 SUPERFAMILY Protein kinase-like (PK-like) 583 851 IPR011009 -
Apr10g2152 867 Pfam Leucine rich repeat 373 433 IPR001611 GO:0005515
Apr10g2152 867 Pfam Leucine rich repeat 277 337 IPR001611 GO:0005515
Apr10g2152 867 Pfam Leucine rich repeat 201 260 IPR001611 GO:0005515
Apr10g2152 867 SMART LRR_typ_2 324 348 IPR003591 -
Apr10g2152 867 SMART LRR_typ_2 372 395 IPR003591 -
Apr10g2152 867 SMART LRR_typ_2 151 174 IPR003591 -
Apr10g2152 867 SMART LRR_typ_2 175 199 IPR003591 -
Apr10g2152 867 Gene3D Ribonuclease Inhibitor 243 339 IPR032675 -
Apr10g2152 867 Gene3D Ribonuclease Inhibitor 85 242 IPR032675 -
Apr10g2152 867 Gene3D Ribonuclease Inhibitor 340 466 IPR032675 -
Apr10g2152 867 Pfam Leucine rich repeat N-terminal domain 89 125 IPR013210 -
Apr10g2152 867 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 28 861 - -
Apr10g2152 867 SUPERFAMILY L domain-like 124 461 - -
Apr10g2152 867 Gene3D Phosphorylase Kinase; domain 1 585 656 - -
Apr10g2152 867 MobiDBLite consensus disorder prediction 527 553 - -
Apr10g2152 867 CDD STKc_IRAK 585 850 - -
Apr10g2152 867 ProSiteProfiles Protein kinase domain profile. 579 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2152 867 PRINTS Leucine-rich repeat signature 202 215 - -
Apr10g2152 867 PRINTS Leucine-rich repeat signature 324 337 - -
Apr10g2152 867 Gene3D Transferase(Phosphotransferase) domain 1 657 866 - -
Apr10g2152 867 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 28 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2152 Apr-Chr10 34094958 34097726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2152 78 852 Receptor kinase-like Gene Family AT3G51740 63.320 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr10g2152 PK_Tyr_Ser-Thr 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2152 - - aprc:113851294 1616.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1463 9 24231483 24235020 Apr10g2152 10 34094958 34097726 ECH
Apr10g2152 10 34094958 34097726 Apr10g2152 10 34094958 34097726 ECH
Apr10g2152 10 34094958 34097726 Apr9g1463 9 24231483 24235020 PCT