Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2137 ATGAGCAAAAACTGGAAATTCAGCTGCTTCATGGATCTTAAGGGAATTCTGTGCCTTCTGACTTTGTGTTTGTTGTTTCAGAACTTTCATTTGTGTTGCTCTTTGAATGAAGAAGGTAAAGCTCTTCTGAAGTTGAAGAAGGGAATAGAAAGTGACCCTTTTGATGCTTTGTGGAATTGGGTTGATGATGAAGTAGCAGCTAACCCCTGTAATTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTGGTGGTCTTGGATTTGAAAGACCTTTGTCTTAGAGGAAATCTGGCACCCGAGCTTGCGAACCTTGTTCACATAAAGTCCATAATTTTGCGGAACAATTCTTTTTATGGAATCATCCCTGAAGGAATTGCACAGTTGAATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACCACTACCTGCAGATCTGGGGAACAATATTTCGCTAACAATCCTTTTGCTGGACAACAATGATAATCTTTGTGGTTTTTCTCATGAAATTAATGAATTGAAGATACTTTCTGAATATCAAGTAGATGAAAACCAACTAACTGGTGCAGAAAAAATGTCAGCTTGCACAGGAAAATCCTTCACGCGGCATGTTGGCCAACATGAAAAGGGTCTTCGAAGACTACTGCAATTTCGTATTCGTGATCATGAAAGTCCTTTTAATCGTGCGGCTGATTTTCCTGATAGTCCTGCCCCATCTCCTTCAGATTCCCCACCTGCGTCACCACCATTGAATCAGAATCCAGCTTTCCATGATCGAAATCATTCTGCTTCTCCTTCTCCCCAGGCTGAACCAGGCTCTGCACCACAATCTAAAAGTACCTCATCAAAGAACCATCATGTAGTTATTTTGGGTGGAGTTGTAGGTGGTTCTGCATTTCTTATCATTTCAATCATTGGCATATATCTCTGTAAAACCAACAAGGTAGCTACCGTAAAACCTTGGGCCACGGGATTAAGTGGACAGCTTCAGAAGGCATTCGTAACAGGCGTGCCAAAACTAAAGAGATCGGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCATCCATTGGAACAGTGTACAAAGGGACTTTATCTAGTGGTGTTGAAATAGCTGTGGCCTCTGTTGCAGTGACTTCATCCAGAGATTGGTCAAAGACTTCAGAAGCCCAATTTAGGAAGAAGATTGACACATTATCAAAAGTGAACCACAAGAATTTCGTAAATCTTCTTGGATATTGTGAAGAAGATGAGCCTTTCACCAGAATGGTGGTTTTTGAATACGCGCCAAACGGAACACTCTTTGAGCATTTACACGTAAAAGAAGCTGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCCATGGGCACGGCTTATTGCCTACAACATATGCACCAGTTGGACCCTCCTGTGGCCCATAGTAACCTGAATTCTTCAGCAATTCAACTCACTGATGATTATGCCGCCAAAATCTCAGATTTGGGTTTCCTAAATGATATAGCTTCAGCTGAGAAAAAAGTTACTGCTAGAAACCACACTGACATGACATTAGCAAGTAACATTTACAGCTTTGGTGTTATATTATTTGAAATGGTAACAGGCAGGCTCCCTTATTCAGTGGATAATGATGGTTCACTTGATGACTGGGCTGCACACTATTTACAAGGGGACCATCCCCTCATACAAATGGTGGATCCAACTCTAGCATCCTTCCAAGAAGAACAACTAAACCAAGTTGCTGCTTTGATTAAATCTTGTGTCCATCATGATCAAAACCAGAGACCAACAATGAAAGAAGTTTGTGTGAGATTAAGAGAGATAACAACAATAACACCTGATGCCGCTGTTCCTAAACTTTCTCCACTATGGTGGGCAGAGCTTGAGATTTCTTCGGTAGATGCAAGCTGA 1929 0.4147 MSKNWKFSCFMDLKGILCLLTLCLLFQNFHLCCSLNEEGKALLKLKKGIESDPFDALWNWVDDEVAANPCNWFGVECSDGRVVVLDLKDLCLRGNLAPELANLVHIKSIILRNNSFYGIIPEGIAQLNELEVLDLGYNNFSGPLPADLGNNISLTILLLDNNDNLCGFSHEINELKILSEYQVDENQLTGAEKMSACTGKSFTRHVGQHEKGLRRLLQFRIRDHESPFNRAADFPDSPAPSPSDSPPASPPLNQNPAFHDRNHSASPSPQAEPGSAPQSKSTSSKNHHVVILGGVVGGSAFLIISIIGIYLCKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSSIGTVYKGTLSSGVEIAVASVAVTSSRDWSKTSEAQFRKKIDTLSKVNHKNFVNLLGYCEEDEPFTRMVVFEYAPNGTLFEHLHVKEAEHLDWGTRLRVAMGTAYCLQHMHQLDPPVAHSNLNSSAIQLTDDYAAKISDLGFLNDIASAEKKVTARNHTDMTLASNIYSFGVILFEMVTGRLPYSVDNDGSLDDWAAHYLQGDHPLIQMVDPTLASFQEEQLNQVAALIKSCVHHDQNQRPTMKEVCVRLREITTITPDAAVPKLSPLWWAELEISSVDAS* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2137 642 MobiDBLite consensus disorder prediction 228 283 - -
Apr10g2137 642 PANTHER BNAA09G55080D PROTEIN 1 642 - -
Apr10g2137 642 Gene3D Ribonuclease Inhibitor 33 213 IPR032675 -
Apr10g2137 642 PANTHER PROTEIN MALE DISCOVERER 2 1 642 - -
Apr10g2137 642 ProSiteProfiles Protein kinase domain profile. 352 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2137 642 MobiDBLite consensus disorder prediction 239 253 - -
Apr10g2137 642 MobiDBLite consensus disorder prediction 255 283 - -
Apr10g2137 642 SUPERFAMILY L domain-like 38 191 - -
Apr10g2137 642 Gene3D Transferase(Phosphotransferase) domain 1 435 622 - -
Apr10g2137 642 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Apr10g2137 642 Gene3D Phosphorylase Kinase; domain 1 324 434 - -
Apr10g2137 642 SUPERFAMILY Protein kinase-like (PK-like) 335 611 IPR011009 -
Apr10g2137 642 Pfam Protein tyrosine and serine/threonine kinase 354 610 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2137 Apr-Chr10 33984524 33988972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2137 10 613 Receptor kinase-like Gene Family AT5G16000 25.949 4.75e-48 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Apr10g2137 PK_Tyr_Ser-Thr 1.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2137 - - gmx:100784541 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2137 10 33984524 33988972 Apr10g2137 10 33984524 33988972 ECH
Apr10g2137 10 33984524 33988972 Apr9g1448 9 24109654 24113884 PCT