Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2131 ATGGGAAGTTCGGTGCGAGTGAAAGAAGCTGTGGTGGTGACACCTTCTGAGCCCACTCCAAGTGGTGTTCTCCCGCTCTCAGCACTTGACTCACAACTCTTTCTTCGCTTCACCATAGAGTATCTCTTAGTATACAGGCCCGCCCCGGGCCTCGACCAAATTGCCACCGCGTCTCGTTTCAAAGCTGCATTAGCCAAAGCTCTTGTTCCCTATTACCCATTTGCAGGAAGGGTTCGGGCCAGGCCTGATGGCCCGGGCCTCGAGGTAGTGTGTCGAGCCCAGGGGGCGATCTTTATAGAAGCCTTTTCCGAACGTTACACTGTCAACGATTTCCAAAAAGCTCCTAAAACAGTGACTCAATGGAGAAAACTATTGTCTCTCTACGTCACCGACGTTCTCAAAGGATCGCCGCCGCTCGTTCTACAGCTGACGTGGCTGGCCGACGGCGCCGCCGCCGTCGGCATCGGAATTAACCATTGCATCTGCGACGGCATCGGGAGCGCTGAGTTTCTCAATTATTTCTCCGATTTAGCCTCCGGGAAACGCGCCGGCGGCAATCCGACACCGGTTTGGGATCGCCACCTTCTCAACCCGCCGCCGGCCACGACGAATCGGGCAAACCCGGCGATTCACCCCGAGTTCAACCGGGTCCCTGATCTGTGCGGGTTCATGAACCGGGTCACGAGTGGGCTCAAACCTATTTGCATTGTGTTCGACGAGAGAAGGATCAACGCGCTAAAGACGGTGGCGCGGCGCACGTGTAAATTGGGTGAGTCGTCGTACACGTCGTTTGAGGTGCTGGCAGCGCATGTGTGGAGGAGCTGGGCGAGAGCATTGGGGTTTCCGGCGAACCAAACGCTGAAGCTTTTGTTCAGTGTGAATGTGAGGAACCGGGTTAAACCGGGTTTACCGGAGGGGTATTATGGGAACGCGTTTGTTTTGGGGTGCGCACAGAGCAGCGCGAGGGAACTGGGAGAGAGAGGGGTCGGGTTCGGGTCGGGTCTGGTGAAGAGGGCGAAGGAGAGGGTGGATAGCGAGCACGTGAGGAGGGTGGCTGAGTTGGTGTCCGAGTCGAGAGCGAGTCCTGACTCGGTGGGTGTTCTGATATTGTCGCAGTGGTCGAGACTGGGTCTTGAGAGGGTTGAACTCGGAATGGGGAAGCCGTTGCATGTGGGTCCCATTTGCTGCGATCGCTATTGTTTGTTTTTGCCGGTCACCGGTGAATGGGAGAGTGTTAAGGTCACGGTGGCCGTCCCCACCTCCGCCGTTGATAGTTTTCACCGTTTCCTCGGTGAATCGAATTTATGA 1308 0.5642 MGSSVRVKEAVVVTPSEPTPSGVLPLSALDSQLFLRFTIEYLLVYRPAPGLDQIATASRFKAALAKALVPYYPFAGRVRARPDGPGLEVVCRAQGAIFIEAFSERYTVNDFQKAPKTVTQWRKLLSLYVTDVLKGSPPLVLQLTWLADGAAAVGIGINHCICDGIGSAEFLNYFSDLASGKRAGGNPTPVWDRHLLNPPPATTNRANPAIHPEFNRVPDLCGFMNRVTSGLKPICIVFDERRINALKTVARRTCKLGESSYTSFEVLAAHVWRSWARALGFPANQTLKLLFSVNVRNRVKPGLPEGYYGNAFVLGCAQSSARELGERGVGFGSGLVKRAKERVDSEHVRRVAELVSESRASPDSVGVLILSQWSRLGLERVELGMGKPLHVGPICCDRYCLFLPVTGEWESVKVTVAVPTSAVDSFHRFLGESNL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2131 435 SUPERFAMILY CoA-dependent acyltransferases 21 187 - -
Apr10g2131 435 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 428 - -
Apr10g2131 435 Gene3D - 3 215 IPR023213 -
Apr10g2131 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 428 - -
Apr10g2131 435 Pfam Transferase family 4 427 - -
Apr10g2131 435 Gene3D - 228 431 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2131 Apr-Chr10 33948699 33950132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2131 5 432 Monolignol Biosynthesis Gene Families AT5G48930 28.027 1.76e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2131 - - gmx:100803812 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2131 10 33948699 33950132 Apr10g2131 10 33948699 33950132 ECH
Apr10g2131 10 33948699 33950132 Apr9g1442 9 24075557 24076967 PCT