Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2130 ATGCAAAGGCAAAGCCAAAGGAGGACTGAAAACAACAAATTCAGATACCGCGGAGTGAGACAACGAAGCTGGAGCAAGTGGGTCGCTGAGATCTCAGAGCCTTGCAACCGAACCCGCAAGTGGCTCGGAACCTTATCCACCTCCCAAGACGACGCCCGAGCCTACGACCGAGCCGCCATCATCCTCTACGATTCTAAGTCTCAACTCAACCTCCGACCCTCTTCTTCCTCTTCCTCGCAAACCCTTCCACCCCTTCTTCCACATCTCTCTCGCTTAGCTCTCTCTTATTCCCATTTCCCTTCGTTCTGGGCCCTGTTAACAATGACAAGGACAACATGGTACAGCACAATCATAGTGACTCTCAACAAGTGGTGTAAGTGCAACACCAATAGTATCAATTATCCTCTGGATTCTGATGCCAGTGCATCGGATGGGAATGGGCCCGTTCACACTGGATCCAACGGAGGAAATTCTTACCAGAACAACGCAAGTCATCATCATGATCATGATGTTGATAATCCGGTGTGGATTCAAAACCAGTACCAGAATTGCCTGTACGAAGATGTGAACGATCCTTCGTGGGTTCAGTTGGGTCTACTTCGTTGA 606 0.4934 MQRQSQRRTENNKFRYRGVRQRSWSKWVAEISEPCNRTRKWLGTLSTSQDDARAYDRAAIILYDSKSQLNLRPSSSSSSQTLPPLLPHLSRLALSYSHFPSFWALLTMTRTTWYSTIIVTLNKWCKCNTNSINYPLDSDASASDGNGPVHTGSNGGNSYQNNASHHHDHDVDNPVWIQNQYQNCLYEDVNDPSWVQLGLLR* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2130 201 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 9 191 - -
Apr10g2130 201 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Apr10g2130 201 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Apr10g2130 201 MobiDBLite consensus disorder prediction 141 171 - -
Apr10g2130 201 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Apr10g2130 201 Pfam AP2 domain 15 60 IPR001471 GO:0003700|GO:0006355
Apr10g2130 201 CDD AP2 15 72 IPR001471 GO:0003700|GO:0006355
Apr10g2130 201 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
Apr10g2130 201 SUPERFAMILY DNA-binding domain 15 72 IPR016177 GO:0003677
Apr10g2130 201 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Apr10g2130 201 MobiDBLite consensus disorder prediction 141 162 - -
Apr10g2130 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4 9 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2130 Apr-Chr10 33943296 33943901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2130 2 73 AP2-EREBP Transcription Factor Family AT2G40220 66.667 2.36e-21 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr10g2130 AP2 4.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2130 K09286 - jre:108991752 128.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2130 10 33943296 33943901 Apr10g2130 10 33943296 33943901 ECH