Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2120 ATGAAGACATCACCGTTTTCTTCCGTCAACCTCCGTCTCGCCGCCGTCACCGTCGTCGTTATATCATTTCTGGCACCCTCATCCCATGCTCTTGGCTCCGGCACGACTTTGGCAATCGCCGACAACTCCGCCACCGTGTGCGGCATCGTGGCCGGTGAAACCACGCGGCGCATTGAGTGTTACCGTGAGGGGGTGATTGTCGCCGTCGTTCCCGACGTTAACTTTACGTCGATTTCCGGTGGGAGGGACTATTTCTGTGGCCTCAGGTTCGGTAACTCCAATTTGCATTGCTGGGATACGATCGCTTCATTCGAAAGAAAAAGGCTTTACAATGATAGTTCTGTTCCATTGGAGAATCTTGCTGTTGGGGATACCCACGTTTGTGCTACGGTGGTGCGTGATGGAACGGTTAGGTGCTGGAGAACCAGTGACACGTTTGATCCACCATCTGGGTCTGATCAATTTGCTTCAATTTCATCTGGGAATGGCTTTTCTTGTGGAATTTTGAGGAATAGTTCTGGGATTCGGTGTTGGGGTGAAGTGAATATTTCGAGGCAGATAGAGAGTGGGTTTGGAAACGTGTCCATGTTGAGTGTTGTAGCGGGTGGTTCTCATGTTTGTGGGTTGGATTCGAGTGGGTTTTTGGTGTGCAAAGGAATTAACAGTTCTGGGCAACTGAATGTTCCTCAAGGTGGGGCTTTTGAATTTTCTGGGTTGGCACTTGGAGCTGAGCATGTTTGTGCTATTAGACGATTGAATGGTTCGGTTATTTGTTGGGGTGGCAATGGGAGATTCTCCGTGAATGTTACAGAAGGAGTTTCCTTTGAGTCAATTGTTTCAGGGTCCAATTTTACTTGTGGATTGACGACGATGAATTTGTCTGTGGTGTGTTGGGGCCCTGGTTGGTCCAATGGTTCAAGTTCTGGTTCTAGCTCAAGGTTTGAGCTCCCCTTGCCACGTATTCTCCCTGGACCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTTCATATCTTGGTTATCAATATCTATGTTCTGGCTTTGGTAACATTTGCAAACCAATGCCCTGTAGCCCTCAATTAACAGTTCCTCCACCATCATCACAACCGCCGCCGCCGCCGCCACCAATGTCTCCTCCAACATCATCTCGATCAAAGACCTTGACTAGAGGCTTATTGGCATTTGCTATTATTGGATCAGTGGGAGCTTTTGCTGGAATATGCACAATAGTTTATTGCTTATGGAGTGGAGTTTGTTTTGGTAAGAAGAAGGTACACAATTCTGTGCAACCAACGATGACAAGAGGTAGCAGTGGTTCCAATGGTGGGGGTGCTTCCAATAATAGCACATCCTCTATATCATCTGTAATTAAGCGTCAGAGTTCAATTATAATGAGGCGCCAGAGGAGTGGAACCTCATCAACAAAGCACCCAGACAGGGCTGAGGAGTTCACCCTTGCGGAACTAGTAGCAGCCACCAACAATTTTTCACTTGAGAACAAGATTGGTTCTGGAAGCTTTGGTGTTGTGTATAAAGGCAAACTTGCCGATGGTCGTGAAGTGGCGATCAAGAGGGGTGAAACCGGTTCAAAGATGAAGAAGTTTCAAGAGAAAGAGACTGCATTTGAGTCTGAATTGTCCTTCTTGTCCCGTCTACACCACAAGCACTTGGTTGGGCTGGTTGGGTTCTGTGAAGAGAAAGATGAAAGGCTTTTAGTGTATGAGTACATGAAGAATGGGGCATTGTATGATCATTTGCATAACAAGAACAATGTGGAGAAGAGTAGCAGTGTCTTGAACTCATGGAAAATGAGGATAAAAATTGCTTTGGATGCTGCTCGAGGAATAGAATATCTCCATAATTATGCAGTTCCATCCATAATTCACAGAGATATCAAGTCTTCCAACATTCTTCTTGATGCTACTTGGACGGCAAGAGTATCTGATTTTGGATTGTCAATGATGAGTCCAGAACCTAACCGTGATTACCGGCCAATAAAAGCAGCAGGAACCGTTGGATACATTGATCCCGAGTACTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTGTATGGGCTTGGAGTTGTACTATTAGAACTTTTGACAGGAAAGAGAGCAATATTCAAGCATGGTGAAGATGGAGGCACTCCATTAAGTGTGGTAGACTTTGCAGTGCCTACTATTTTGGCTGGAGAATTGGTGAAAATTTTGGATCCAAGGGTTGGACCCCCAGATGTGAATGAAGGAGAGGCAGTGGAGTTAGTATCCTATATTGCTATCCATTGTGTTAATTTGGAAGGCAAAGATAGACCAACGATAGCTGACATTGTGCTCAATTTGGAAAGGGCCTTGGCTATTTGTGATACTATCCATGATAGCAATTCCAGCGGTAAAATCTCTGTTGTTTCAGAATGA 2415 0.4534 MKTSPFSSVNLRLAAVTVVVISFLAPSSHALGSGTTLAIADNSATVCGIVAGETTRRIECYREGVIVAVVPDVNFTSISGGRDYFCGLRFGNSNLHCWDTIASFERKRLYNDSSVPLENLAVGDTHVCATVVRDGTVRCWRTSDTFDPPSGSDQFASISSGNGFSCGILRNSSGIRCWGEVNISRQIESGFGNVSMLSVVAGGSHVCGLDSSGFLVCKGINSSGQLNVPQGGAFEFSGLALGAEHVCAIRRLNGSVICWGGNGRFSVNVTEGVSFESIVSGSNFTCGLTTMNLSVVCWGPGWSNGSSSGSSSRFELPLPRILPGPCVQSSCSECGSYLGYQYLCSGFGNICKPMPCSPQLTVPPPSSQPPPPPPPMSPPTSSRSKTLTRGLLAFAIIGSVGAFAGICTIVYCLWSGVCFGKKKVHNSVQPTMTRGSSGSNGGGASNNSTSSISSVIKRQSSIIMRRQRSGTSSTKHPDRAEEFTLAELVAATNNFSLENKIGSGSFGVVYKGKLADGREVAIKRGETGSKMKKFQEKETAFESELSFLSRLHHKHLVGLVGFCEEKDERLLVYEYMKNGALYDHLHNKNNVEKSSSVLNSWKMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILLDATWTARVSDFGLSMMSPEPNRDYRPIKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKHGEDGGTPLSVVDFAVPTILAGELVKILDPRVGPPDVNEGEAVELVSYIAIHCVNLEGKDRPTIADIVLNLERALAICDTIHDSNSSGKISVVSE* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2120 804 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 2 800 - -
Apr10g2120 804 Gene3D - 191 338 IPR009091 -
Apr10g2120 804 Gene3D - 18 190 IPR009091 -
Apr10g2120 804 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 2 800 IPR044815 GO:0004674
Apr10g2120 804 SUPERFAMILY RCC1/BLIP-II 21 266 IPR009091 -
Apr10g2120 804 ProSiteProfiles Protein kinase domain profile. 495 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2120 804 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Apr10g2120 804 MobiDBLite consensus disorder prediction 459 478 - -
Apr10g2120 804 MobiDBLite consensus disorder prediction 361 384 - -
Apr10g2120 804 SMART serkin_6 495 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2120 804 MobiDBLite consensus disorder prediction 430 452 - -
Apr10g2120 804 Pfam Protein kinase domain 496 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2120 804 SUPERFAMILY Protein kinase-like (PK-like) 472 780 IPR011009 -
Apr10g2120 804 Gene3D Transferase(Phosphotransferase) domain 1 576 796 - -
Apr10g2120 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Apr10g2120 804 MobiDBLite consensus disorder prediction 361 380 - -
Apr10g2120 804 Gene3D Phosphorylase Kinase; domain 1 455 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2120 Apr-Chr10 33851922 33854642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2120 1 804 Receptor kinase-like Gene Family AT3G55950 58.625 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Apr10g2120 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2120 - - gmx:100786639 1238.79