Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g2119 | ATGGCAGATTTCACGAAGGATGAGAGTGTCCACGGTTTCGTTTCGCTGGTGAATGAAGCTATTAAGAGTAATGGTTCGATCACGGCGAGTTCGGGAATATCCAATAGAAAAGTCCATAGTTTTGCTACGCTAGTGAACAATGCTTTCAAGAGAAGTGGTGAAGCTATAGAAGATTCGGGAACATCACGTGTCCGTGGTTTTGTGTCGCGAGTGGACAGTGCCTTAAGGAGTATTGCTGCAGCTATGGAAGATTGGGGAACATCACGTGTGCCTGGTTTTGCTTCACGTGTGGATAATGATATAAAGAGCAACAGTGTTACTGCACTATCACTACAACTGATATCAAATGCACTAGGAAATGTTATTGAAGGCTTTAGATTGTTCACCCTTGTGGAGCTTCAAGCAGCCACCAATAATTTCTCACTTGAGAACACGATTGGTGCTGGAAGCTTTGGTCTTGTTTACAGGGGCAAACTCTTCGATGGCCGTGAGGTGGCGATCAAAAGGGGTGCAACTGGTTCGAAGATGAAGAATTTTCAACAGACGTTTAAAGCATATGAGTGTGAATTGGCCTTCTTAATCCGTATACACCACAAGAATTTGCTTAAGATGGTTGGGTTCTGCGAAGAGAAACATGAAAGGCTTTTGGTGTTCGAGTACATGAAGAATGGGTCATTGTATGATCATTTACATGGAAAGAACAAGGGTAGTAGTGTGCTGAACTCATGGAAAATGAGGATCAAAATCGCTTTGGATGCTTCCCGAGGAATAGAATATCTCCATAATTATGCAGTTCCATCAATAATTCACAGAGATATCAAGTCTTCCAACATCCTTATTGATGCTACTTGGATAGCAAGAGTATCTGATTTTGGGTTATCATTGAAAAGCGGTGATTATCAATCTGTGACAATAGCTGGAACTGTTGGATATTTAGATCCTGACTACTATAGTCAAAATTTATTGACAGCAAAGAGTGATGTGTATGGCTTTGGAATTGTACTATTAGAACTTTTAACTGGAAAGAGAGCTATATTCAAGCATGGTGAAGATGGAGGCACTCTATTAAATGTGGTAGACTTTGCAGTGCCTGCTATTTTGGGTGGAGATTTAGTGAAAATTTTGGATCCAAAGGTTGGACCCCCGGATGTGAACGAAAGAGAGGCAGTGGAGTTAGTGTCCTACACTGCTATCCACTGTGTTAATTTGGAAGGCAAAGATAGACCAACCATAGTCGATGTTGTGCTCAATTTGGAGCGGGCCATGTCTATTTGTGATGCTAGCCATGATATATAG | 1296 | 0.4151 | MADFTKDESVHGFVSLVNEAIKSNGSITASSGISNRKVHSFATLVNNAFKRSGEAIEDSGTSRVRGFVSRVDSALRSIAAAMEDWGTSRVPGFASRVDNDIKSNSVTALSLQLISNALGNVIEGFRLFTLVELQAATNNFSLENTIGAGSFGLVYRGKLFDGREVAIKRGATGSKMKNFQQTFKAYECELAFLIRIHHKNLLKMVGFCEEKHERLLVFEYMKNGSLYDHLHGKNKGSSVLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWIARVSDFGLSLKSGDYQSVTIAGTVGYLDPDYYSQNLLTAKSDVYGFGIVLLELLTGKRAIFKHGEDGGTLLNVVDFAVPAILGGDLVKILDPKVGPPDVNEREAVELVSYTAIHCVNLEGKDRPTIVDVVLNLERAMSICDASHDI* | 432 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g2119 | 431 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 268 | 280 | IPR008271 | GO:0004672|GO:0006468 | |
Apr10g2119 | 431 | ProSiteProfiles | Protein kinase domain profile. | 140 | 431 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g2119 | 431 | ProSitePatterns | Protein kinases ATP-binding region signature. | 146 | 168 | IPR017441 | GO:0005524 | |
Apr10g2119 | 431 | SMART | serkin_6 | 140 | 422 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g2119 | 431 | Gene3D | Transferase(Phosphotransferase) domain 1 | 221 | 429 | - | - | |
Apr10g2119 | 431 | Gene3D | Phosphorylase Kinase; domain 1 | 103 | 220 | - | - | |
Apr10g2119 | 431 | SUPERFAMILY | Protein kinase-like (PK-like) | 123 | 418 | IPR011009 | - | |
Apr10g2119 | 431 | Pfam | Protein kinase domain | 141 | 414 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g2119 | 431 | CDD | STKc_IRAK | 146 | 420 | - | - | |
Apr10g2119 | 431 | PANTHER | SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN | 82 | 427 | - | - | |
Apr10g2119 | 431 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 | 82 | 427 | IPR044815 | GO:0004674 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g2119 | Apr-Chr10 | 33847723 | 33849252 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g2119 | 128 | 429 | Receptor kinase-like Gene Family | AT3G55950 | 63.836 | 9.49e-133 | 399 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Apr10g2119 | Pkinase | 4.9e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g2119 | - | - | gmx:100805573 | 485.337 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr10g2119 | 10 | 33847723 | 33849252 | Apr9g1424 | 9 | 23859183 | 23861972 | PCT |