Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2119 ATGGCAGATTTCACGAAGGATGAGAGTGTCCACGGTTTCGTTTCGCTGGTGAATGAAGCTATTAAGAGTAATGGTTCGATCACGGCGAGTTCGGGAATATCCAATAGAAAAGTCCATAGTTTTGCTACGCTAGTGAACAATGCTTTCAAGAGAAGTGGTGAAGCTATAGAAGATTCGGGAACATCACGTGTCCGTGGTTTTGTGTCGCGAGTGGACAGTGCCTTAAGGAGTATTGCTGCAGCTATGGAAGATTGGGGAACATCACGTGTGCCTGGTTTTGCTTCACGTGTGGATAATGATATAAAGAGCAACAGTGTTACTGCACTATCACTACAACTGATATCAAATGCACTAGGAAATGTTATTGAAGGCTTTAGATTGTTCACCCTTGTGGAGCTTCAAGCAGCCACCAATAATTTCTCACTTGAGAACACGATTGGTGCTGGAAGCTTTGGTCTTGTTTACAGGGGCAAACTCTTCGATGGCCGTGAGGTGGCGATCAAAAGGGGTGCAACTGGTTCGAAGATGAAGAATTTTCAACAGACGTTTAAAGCATATGAGTGTGAATTGGCCTTCTTAATCCGTATACACCACAAGAATTTGCTTAAGATGGTTGGGTTCTGCGAAGAGAAACATGAAAGGCTTTTGGTGTTCGAGTACATGAAGAATGGGTCATTGTATGATCATTTACATGGAAAGAACAAGGGTAGTAGTGTGCTGAACTCATGGAAAATGAGGATCAAAATCGCTTTGGATGCTTCCCGAGGAATAGAATATCTCCATAATTATGCAGTTCCATCAATAATTCACAGAGATATCAAGTCTTCCAACATCCTTATTGATGCTACTTGGATAGCAAGAGTATCTGATTTTGGGTTATCATTGAAAAGCGGTGATTATCAATCTGTGACAATAGCTGGAACTGTTGGATATTTAGATCCTGACTACTATAGTCAAAATTTATTGACAGCAAAGAGTGATGTGTATGGCTTTGGAATTGTACTATTAGAACTTTTAACTGGAAAGAGAGCTATATTCAAGCATGGTGAAGATGGAGGCACTCTATTAAATGTGGTAGACTTTGCAGTGCCTGCTATTTTGGGTGGAGATTTAGTGAAAATTTTGGATCCAAAGGTTGGACCCCCGGATGTGAACGAAAGAGAGGCAGTGGAGTTAGTGTCCTACACTGCTATCCACTGTGTTAATTTGGAAGGCAAAGATAGACCAACCATAGTCGATGTTGTGCTCAATTTGGAGCGGGCCATGTCTATTTGTGATGCTAGCCATGATATATAG 1296 0.4151 MADFTKDESVHGFVSLVNEAIKSNGSITASSGISNRKVHSFATLVNNAFKRSGEAIEDSGTSRVRGFVSRVDSALRSIAAAMEDWGTSRVPGFASRVDNDIKSNSVTALSLQLISNALGNVIEGFRLFTLVELQAATNNFSLENTIGAGSFGLVYRGKLFDGREVAIKRGATGSKMKNFQQTFKAYECELAFLIRIHHKNLLKMVGFCEEKHERLLVFEYMKNGSLYDHLHGKNKGSSVLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWIARVSDFGLSLKSGDYQSVTIAGTVGYLDPDYYSQNLLTAKSDVYGFGIVLLELLTGKRAIFKHGEDGGTLLNVVDFAVPAILGGDLVKILDPKVGPPDVNEREAVELVSYTAIHCVNLEGKDRPTIVDVVLNLERAMSICDASHDI* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2119 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Apr10g2119 431 ProSiteProfiles Protein kinase domain profile. 140 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2119 431 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Apr10g2119 431 SMART serkin_6 140 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2119 431 Gene3D Transferase(Phosphotransferase) domain 1 221 429 - -
Apr10g2119 431 Gene3D Phosphorylase Kinase; domain 1 103 220 - -
Apr10g2119 431 SUPERFAMILY Protein kinase-like (PK-like) 123 418 IPR011009 -
Apr10g2119 431 Pfam Protein kinase domain 141 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2119 431 CDD STKc_IRAK 146 420 - -
Apr10g2119 431 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 82 427 - -
Apr10g2119 431 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 82 427 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2119 Apr-Chr10 33847723 33849252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2119 128 429 Receptor kinase-like Gene Family AT3G55950 63.836 9.49e-133 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Apr10g2119 Pkinase 4.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2119 - - gmx:100805573 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2119 10 33847723 33849252 Apr9g1424 9 23859183 23861972 PCT