Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2117 ATGACCAATTTCACAAACCATGAAAATGCCCATGATTTCGTTTGGCGAGTGAAAAATGAGAGTATAACTACAAACATGACGAATTCGGGAATATCCAATGAACATGTCCATAGTTATGCTTCGCAAGTGAACAATGCTCTAAGAAGTATTAACGAAGCTACAGAAGATATGGGAGCAATAACATCATCACGTGTGCATGGTTTTGCTTCGGGAGTGGACAATGCCTTAAGGAGTATCAACAGCGAAGCTAAAGAAGATTTCGGAAACATAACATCACGTGTTCACGGTTATGCTTCGCCAGTGGATAACCATATCAAGAACAACACAATTGGTACTATATCATCATCACAAGTGAAATCAAATGCACCAAAACGCATTTCCCGTGATGTTGAAGGTTTTAGATTATTTTCCCTGGCTGAGCTTGAAGATGCCACCAACAACTTCTCGGTGGAAAACAAGCTTGGTGGTGATTTGTACAGAGGCAGACTTGGTGATGGTCGTGACGTGGTAATCAAGAGGAAGAGGTTCCACATACCCGCATCTGAATTGGCATTCTTGTCCCGTATACACCACAAACACTTGGTTAGGTTTGTTGGGTTCTGTGAAGTGAGAGATGAAGAAGAGTTCTTGGTATATGAGTACATGAAGAACGGATCAGTGCAAGATCATTTGCATGGCAAGAACAACGTGGACAAGAGTAGCACCTTCTTGAATTCATCATGGAAAATGAGGATCAAAGTTGCTTTGGAAGCTGCACGAGGTATAGAATATCTTCATGATTGTGCAGATCCATCTATAATTCACGGTGACATCAACTCTTCTAACATTCTTCTTGATGAGACTTGGACTACAAGAGTATCTGATTATGGGTTATCATTAACGAGTCCAGAATCTGAGGATGAAGAAGGAACCGTTGGATACACTGACCCTGATTATGATAATGTAAATGAGTTGAAAGAAAAGAGTGGTGATGCATATGGACTTGGAGTTGTACTGCTAGAGCTTCTAACAGGAAGGAGAAATATAATTGAAGGAGTTACCCTACTAAGTGTTATAGATATTCAAGATTTTACAAAAGGAGAGAGAGACGTAGATGAAGTGGGTTTCTTGGTAGACTTTGCAGTGCCTCATATTAAGGGTAGAACATTGGAAAAAGTTTTGGACCCAAGGGTTGAACCACCGGTGAAGGAAAGTGAAGTAAAGGCATTGTATTCAATGTCCCACATCGCTATGCGTTGTGCAGAACGGAAATGGGAAGATAGACCAGTCATTGCTGACATTGTGACCAATTTGAAGGAGGCGTTCGATATTTACTGA 1317 0.4085 MTNFTNHENAHDFVWRVKNESITTNMTNSGISNEHVHSYASQVNNALRSINEATEDMGAITSSRVHGFASGVDNALRSINSEAKEDFGNITSRVHGYASPVDNHIKNNTIGTISSSQVKSNAPKRISRDVEGFRLFSLAELEDATNNFSVENKLGGDLYRGRLGDGRDVVIKRKRFHIPASELAFLSRIHHKHLVRFVGFCEVRDEEEFLVYEYMKNGSVQDHLHGKNNVDKSSTFLNSSWKMRIKVALEAARGIEYLHDCADPSIIHGDINSSNILLDETWTTRVSDYGLSLTSPESEDEEGTVGYTDPDYDNVNELKEKSGDAYGLGVVLLELLTGRRNIIEGVTLLSVIDIQDFTKGERDVDEVGFLVDFAVPHIKGRTLEKVLDPRVEPPVKESEVKALYSMSHIAMRCAERKWEDRPVIADIVTNLKEAFDIY* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2117 438 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 31 437 IPR044815 GO:0004674
Apr10g2117 438 Gene3D Phosphorylase Kinase; domain 1 118 214 - -
Apr10g2117 438 Pfam Protein tyrosine and serine/threonine kinase 181 430 IPR001245 GO:0004672|GO:0006468
Apr10g2117 438 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 31 437 - -
Apr10g2117 438 SUPERFAMILY Protein kinase-like (PK-like) 129 431 IPR011009 -
Apr10g2117 438 Gene3D Transferase(Phosphotransferase) domain 1 215 437 - -
Apr10g2117 438 ProSiteProfiles Protein kinase domain profile. 104 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2117 Apr-Chr10 33836321 33837637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2117 136 437 Receptor kinase-like Gene Family AT3G55950 51.070 1.16e-81 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Apr10g2117 PK_Tyr_Ser-Thr 1.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2117 - - aprc:113851285 859.366