Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2095 ATGGACGAGGACATGTCAGGCTTTTGTATTAGAGGTGCAAGTGTTCGTAGTAACAGTGGCAGTGCCACTGGCACTAAGTGTGGGCGTTGGAATCCCACTACTGAACAAGTTAAGCTTCTGACTGAACTGTTCAGTTCAGGACTTCGCACACCAAGCACTGATCAGATTCAAAAAATCTCTACTCAGCTAAGTTTCTATGGTAAGATTGAGAGCAAGAACGTGTTCTATTGGTTTCAAAACCATAAGGCAAGGGAAAGACAAAAGCGTCGCAAGGTATCTTTTCACGATAAGGATGTGATTCGTAGAGAAAACTCCATGGCCATCAGTTCTTCTACACAAAATTTCGCACAGTTTTATCAGATTAATGAGCCCGAGAGGGGGATTGAGACTCTTCAACTCTTTCCCTTGAACTCTTTTGGAGAATCAGAATCAAAGAATCTGAGGGATCATGCAAATGAATGCAGGGATAATACGATGTTTTCATTCACAATGGGGGAACAAATGGACCACCCACCTTTAGATCTTCGCTTGAGTTTTCTGTAA 543 0.4236 MDEDMSGFCIRGASVRSNSGSATGTKCGRWNPTTEQVKLLTELFSSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFHDKDVIRRENSMAISSSTQNFAQFYQINEPERGIETLQLFPLNSFGESESKNLRDHANECRDNTMFSFTMGEQMDHPPLDLRLSFL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2095 180 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 169 - -
Apr10g2095 180 SUPERFAMILY Homeodomain-like 19 91 IPR009057 -
Apr10g2095 180 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 169 IPR044555 GO:0003700|GO:0099402
Apr10g2095 180 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Apr10g2095 180 SMART HOX_1 25 92 IPR001356 GO:0003677
Apr10g2095 180 CDD homeodomain 29 89 IPR001356 GO:0003677
Apr10g2095 180 Gene3D - 26 95 - -
Apr10g2095 180 Pfam Homeodomain 27 87 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2095 Apr-Chr10 33662834 33663613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2095 8 180 Wox Gene Family AT3G11260 55.676 6.06e-62 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Apr10g2095 Homeodomain 9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2095 - - gmx:100791433 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1408 9 23683450 23684312 Apr10g2095 10 33662834 33663613 ECH
Apr10g2095 10 33662834 33663613 Apr10g2095 10 33662834 33663613 ECH
Apr10g2095 10 33662834 33663613 Apr9g1408 9 23683450 23684312 PCT