Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2093 ATGTCTTCTTCGTATTCTGCACCCACTGTCTCTGTAACTGTCCTGTCAACATGCACCGTTCAGCCTCACCAAAAATCCACTCTCCCAGACCTTAAGCTCTCTATCTCAGACCTTAACATGCTCTGTTCTCACTACATCCAAAAGGGATGTCTCTTCACAACCCCTAATCTATCCTCTCATGCTCTCATCCCTCACCTCACCAACGCTCTTTCTCACACCCTCTCTCTCTTCCCCCCATTCGCCGGCAGATTAAAAACCCACGCCGATGCCCATGTTTACATCACATGCAACGACGCCGGCGTTCATTTCATCCACGCCAACGCCGCCAATCTCACCGTCACCGACCTCCTCTCCCCACCCGATGTTCCTCAAGCCTTTCACCAACTCTTCCCCTTCCACCGCAAAATTAGTTACACTGCTCATTTCTCCCCTATCATGGCCCTTCAGGTCACCGACCTCGCCGACGGCTTCTTTATCGGCTGCGCCGTCTGTCACGCCGTCACCGACGGCGCTTCCTTCTGGAATTTCTTCAACACCTTCGCCGAAATCTCCAGGGGATTCACGTGTCCCTCCAGGCTCCCGGATTTCCTCCGGGAGTCCATTCTGATCTCCAAGGTTGTGCTCCGGTTGCCGGACGGTGACATCAAGGTGACGTTCAACCCCGACGAGCCTCTTCGCGAGAGAATCTTCAGCTTCAGCCGCGAAACGATTCAGAAGCTGAAAGCCACGTTGAATCGCCGGAATTGGGGAGAGAACTTTGACGCTGCTGAGGTGATGGCGAAGATGAGCAGCGACACGCAACTGAAACCGGTTACGAGAAGCGTAACTGACGAAACAGTGGAGATTTCGTCGTTTCAATCGCTGTGCGCGCTGTTGTGGCGTTGTGTTACACGCGCGAGGAATCTCCAGGGGACGAAAACGACGACGTTTAGAATGGCGGTTAATGTTCGCCAACGCATGGAGCCCAAGTTGAGGGACAGTTATTTCGGGAACGCAATTCAGAGCACTGCCACGTGTGCAACAGTCGCTGACGTGGTGTCTAAGGAGCTGCGGTGGGTCGCGGAGGAGATGAACAAAAGCGTCAGGGCGTACGATAGCGCTATGGTGCGCCGTGCCGTGGAGAATTGGGAGCTGGAGCCGAAGTGCTTTGAGCTGGGGAACCACGACGGCGCCACCGTGCAGATGGGAAGTTCGCCGAGATTCCCAATGTACGACAATGATTTTGGTTGGGGAAGGCCCTTGGCGGTGCGTAGCGGCGGTGCTAACAAGTTTGACGGCAAGATTTCGGCGTTTCCCGGGAGGAATGGCGGCGGGGCCGTGGACTTGGAGGTGGTTTTGGCGTCAGAAACGATGGAGCGACTCGAGAATGATTCCGAGTTCATGCTTTACGTGTCTGGTCAGTGA 1404 0.5499 MSSSYSAPTVSVTVLSTCTVQPHQKSTLPDLKLSISDLNMLCSHYIQKGCLFTTPNLSSHALIPHLTNALSHTLSLFPPFAGRLKTHADAHVYITCNDAGVHFIHANAANLTVTDLLSPPDVPQAFHQLFPFHRKISYTAHFSPIMALQVTDLADGFFIGCAVCHAVTDGASFWNFFNTFAEISRGFTCPSRLPDFLRESILISKVVLRLPDGDIKVTFNPDEPLRERIFSFSRETIQKLKATLNRRNWGENFDAAEVMAKMSSDTQLKPVTRSVTDETVEISSFQSLCALLWRCVTRARNLQGTKTTTFRMAVNVRQRMEPKLRDSYFGNAIQSTATCATVADVVSKELRWVAEEMNKSVRAYDSAMVRRAVENWELEPKCFELGNHDGATVQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKISAFPGRNGGGAVDLEVVLASETMERLENDSEFMLYVSGQ* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2093 467 Gene3D - 11 209 IPR023213 -
Apr10g2093 467 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 465 - -
Apr10g2093 467 Gene3D - 213 456 IPR023213 -
Apr10g2093 467 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 465 - -
Apr10g2093 467 Pfam Transferase family 11 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2093 Apr-Chr10 33650594 33651997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2093 10 456 Monolignol Biosynthesis Gene Families AT5G48930 26.754 8.68e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2093 - - gmx:100792476 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1406 9 23671620 23673581 Apr10g2093 10 33650594 33651997 ECH
Apr10g2093 10 33650594 33651997 Apr10g2093 10 33650594 33651997 ECH
Apr9g1406 9 23671620 23673581 Apr10g2093 10 33650594 33651997 PCT