Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2091 ATGTCGGAGGCGTTGATCAATGGATTGGCTGGAGCTGGAGGAGGGATCATTGCTCAGCTCATCACATACCCACTTCAAACTGTAAACACTCGTCAACAAACCGAGCGTGATCCGAACAAAGACAAGAGGAGTCAGGGAACCCTCGAACGAATGTGTCAGGTTGTAAAAGACGAGGGTTGGGAACGGTTGTATGGAGGCTTGATGCCATCGCTAGTAGGCACAGCTGCGTCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACAAAGCTGAAGCAGCTGCACTACAACAGAAGAAAATGGGCATTGGCGATGGATCGGTTGGAATGCTCTCCTCACTTCTTGTTGCTGCTTTATCTGGGTGTGTTAATGTGCTCTTGACAAATCCAATATGGGTAGTTGTTACTCGTATGCAGACACATAGAAAAGACTTAAATGGAACTCCATCCAGTCAGGGATTGTTAGTTGTCCCTGAGCAACCAATTATTTCTGCAGTTGAGCCTCTTCCTTATGGTACTAGCCATGTGATTCAGGAAATCTACGATGAAGCTGGAATATGGGGTTTCTGGAAAGGTGTATTACCAACATTGATCATGGTAAGCAATCCTTCCATACAATTCATGCTGTATGAAGCCATGTTGGCAAAATTAAGAAAAAGACGTGATTCGAGTAAGAAGGGTAGCAATGGGGTAACTGCTTTAGAGATATTTCTTCTTGGAGCTTTAGCTAAGCTTGGAGCTACTGTTGTAACCTATCCACTCCTCGTTGTAAAGGCAAGGCTCCAAGCTAGGCAAGATAAAAGTGGAGACAGGAGGCACCATTATAAAGGTACGTGGGATGCTATTATTAAGATGATCCGCTATGAAGGATTTTATGGATTTTACAAAGGTATGGGCACAAAAATTGTACAAAGTGTGCTGGCTGCAGCTGTTTTATTCATGATGAAGGAAGAACTAGTGAAGGGGGTTCATTTCTTGCTTGCCAAGGATGCCACCAAAGCTGCAAAGCCTAAGCATCCATGA 1026 0.4376 MSEALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPNKDKRSQGTLERMCQVVKDEGWERLYGGLMPSLVGTAASQGVYYYFYQIFRNKAEAAALQQKKMGIGDGSVGMLSSLLVAALSGCVNVLLTNPIWVVVTRMQTHRKDLNGTPSSQGLLVVPEQPIISAVEPLPYGTSHVIQEIYDEAGIWGFWKGVLPTLIMVSNPSIQFMLYEAMLAKLRKRRDSSKKGSNGVTALEIFLLGALAKLGATVVTYPLLVVKARLQARQDKSGDRRHHYKGTWDAIIKMIRYEGFYGFYKGMGTKIVQSVLAAAVLFMMKEELVKGVHFLLAKDATKAAKPKHP* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2091 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 340 IPR044712 GO:0006862|GO:0055085
Apr10g2091 341 MobiDBLite consensus disorder prediction 29 48 - -
Apr10g2091 341 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 340 - -
Apr10g2091 341 Gene3D Mitochondrial carrier domain 2 325 IPR023395 -
Apr10g2091 341 Pfam Mitochondrial carrier protein 6 90 IPR018108 -
Apr10g2091 341 Pfam Mitochondrial carrier protein 233 321 IPR018108 -
Apr10g2091 341 Pfam Mitochondrial carrier protein 109 220 IPR018108 -
Apr10g2091 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 323 IPR018108 -
Apr10g2091 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Apr10g2091 341 SUPERFAMILY Mitochondrial carrier 4 319 IPR023395 -
Apr10g2091 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2091 Apr-Chr10 33628445 33633124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2091 24 318 Chloroplast and Mitochondria Gene Families AT2G47490 30.333 7.74e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2091 K13354 - gmx:100775784 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2091 10 33628445 33633124 Apr10g2091 10 33628445 33633124 ECH