Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2067 ATGGATGGTTATAGATTCTCCACCCTTTTGCTGCTCCTTCTTTGCTTTACTTCATTTCTTCATATATGTCACTCATCATCCCCAATGAAGAGTTACATTGTCTACACTGGCAACAGCATAAAGGATGCAGCTTCTGCGTTGACACTTTACACAAGCATGCTACAAGAAGTTGCTGACAGCAATGCTGAGCCCAAGTCGGTATTGCACTACTACAAACGTAGCTTTGGAGGCTTTGTTGCTAAGCTAACAGAGGAGGAAGCCAAAAGAATGGCTGGAGTTGATGGAGTGGTGTCTGTTTTTCCAAATGGAAAGAAACATCCTCATACAACAAGGTCATGGAATTTTATTGGCTTTCCATTACAAACACAGAGAGCACCAGCTGAGAGTGATGTCATCATTGGAGTAATTGACACTGGAATTTGGCCAGAATCTGACAGCTTCAAAGACAAAGGATTTGGTCCACCACCAAGTAAATGGAAGGGCACATGCCAAACTTCAAATTTCACCTGCAATAATAAAATCATTGGAGCTAAGTATTACAAACTTGATAAATCATTTTTTGATGAAGATCTAAAATCTCCAAGAGATTCAGAGGGTCATGGCACTCACACTGCATCAACAGCAGCTGGGAATTTGGTTAGCAATGCTAGCATGTTAGGCCTTGCAGAAGGAACAGCAAGAGGTGGCGCGCCATCGGCACGCATTGCCGTGTATAAAGTGTGTTGGTTTGATGGTTGTTCTGATGCAGACATACTTGCTGCATTTGATGATGCAATTGCGGATGGGGTTGACATAATATCACTTTCTATTGGAGGGTTCAGTGATGGAAACTACTTTACAGATGCATCATCCGTTGGAGCATTTCATGCTGTGAGAAATGGAATATTGACAGTAACTTCAGCAGGAAACAATGGGCCAAAACCTTCTTCCCTTTCAAATTATTCACCTTGGTTAATTGCTGTGGGTGCTACAACCATAGACAGAAAGTTTGTTACCAAGGTTGAATTAGGTAACAACATTACTTATGAGGGTACATCAATAAATTCATTTGACCTCAAGGGAAAATTGTATCCCATAATTTATGGTGGAGATGCTCCAAGCAAAGGCTTAGATGGATCTTTATCTCGGTTTTGCTTCAGTAGTTCATTGGACAAAAAGTTAGTTCAGGGCAAAATTGTTCTTTGTGAGGGCAGAAGCAAGGCAACAGGGCCTCTCTATGCTGATGCTGTTGGGGCCTTGATACAGGGTCAAAGTTATAAAGATCTTGCTCCCTCTCTTCCATTGCCTGGATCATACCTTGACTTGAAGGATGGTATCGCTGTATATGACTACATAAACTCTACAGGGGCTCCAACTGCAACCATACTTAAGAGTGATGAGATAAAAGATACTTTAGCCCCTGCTGTGGCCTCTTTCTCTTCAAGGGGTCCAAGCCTTGTTACACCTGAAGTTCTCAAGCCGGATTTAGTGGCTCCAGGAGTTGCCATTCTAGCTAGTTGGTCTCCACTTTCCTCCCCTTCTGAAATTGAAGGAGACAACAGAACATTACAGTTCAATATCATCACAGGAACTTCAATGGCTTGCCCACATGTTTCTGGTGCAGCAGCATATGTTAAATCTTTTCATCCAACATGGTCTCCTGCTGCTATTCGTTCAGCTCTAATGACCACAGCTAAACCACTTAGTCCCAAGACTAATCATGATGCAGAATTTGCATATGGCGCGGGCCAAATTGATCCTTTAAAGGCTGCTGACCCTGGTTTAGTATATGATGCTGGTGAAATAGACTATGTAAGGTTTTTATGTGGACAAGGCTATAGTTCAAGGAGTCTACAACTCATCACAGGGGATAAAAGTAGCTGCTCTGAAGCAACATATGGTACAGCAAGGGATCTAAACTATGCATCATTTGCTCTTCAAGTCCCACCCTCCAACACCACTGTTAGTGGAAGTTTTAAGAGAACCGTTACAAATGTTGGGTCATCAACATCCTCATATAAAGCTATTGTGACGGCTCCTCAAGGACTAAAAGTTGAAGTGAACCCAAGTGTTCTATCTTTCACTTCTCTTGGCCAAAAGCAAACATTTGTGCTCACAATTGATGGAACAATGGAAGAATCCAAGGTATCAGCCTCTTTGGTGTGGGATGATGGTAAATTCAAAGTGAGGAGCCCCATCATTGTGTTTAATACAGCATAA 2199 0.422 MDGYRFSTLLLLLLCFTSFLHICHSSSPMKSYIVYTGNSIKDAASALTLYTSMLQEVADSNAEPKSVLHYYKRSFGGFVAKLTEEEAKRMAGVDGVVSVFPNGKKHPHTTRSWNFIGFPLQTQRAPAESDVIIGVIDTGIWPESDSFKDKGFGPPPSKWKGTCQTSNFTCNNKIIGAKYYKLDKSFFDEDLKSPRDSEGHGTHTASTAAGNLVSNASMLGLAEGTARGGAPSARIAVYKVCWFDGCSDADILAAFDDAIADGVDIISLSIGGFSDGNYFTDASSVGAFHAVRNGILTVTSAGNNGPKPSSLSNYSPWLIAVGATTIDRKFVTKVELGNNITYEGTSINSFDLKGKLYPIIYGGDAPSKGLDGSLSRFCFSSSLDKKLVQGKIVLCEGRSKATGPLYADAVGALIQGQSYKDLAPSLPLPGSYLDLKDGIAVYDYINSTGAPTATILKSDEIKDTLAPAVASFSSRGPSLVTPEVLKPDLVAPGVAILASWSPLSSPSEIEGDNRTLQFNIITGTSMACPHVSGAAAYVKSFHPTWSPAAIRSALMTTAKPLSPKTNHDAEFAYGAGQIDPLKAADPGLVYDAGEIDYVRFLCGQGYSSRSLQLITGDKSSCSEATYGTARDLNYASFALQVPPSNTTVSGSFKRTVTNVGSSTSSYKAIVTAPQGLKVEVNPSVLSFTSLGQKQTFVLTIDGTMEESKVSASLVWDDGKFKVRSPIIVFNTA* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2067 732 CDD PA_subtilisin_like 334 455 - -
Apr10g2067 732 CDD Peptidases_S8_3 105 558 IPR034197 -
Apr10g2067 732 Pfam Fibronectin type-III domain 631 728 IPR041469 -
Apr10g2067 732 Gene3D - 327 462 - -
Apr10g2067 732 ProSiteProfiles Serine proteases, subtilase domain profile. 112 584 - -
Apr10g2067 732 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 729 IPR045051 -
Apr10g2067 732 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 108 IPR037045 -
Apr10g2067 732 Pfam Peptidase inhibitor I9 31 103 IPR010259 -
Apr10g2067 732 PANTHER PUTATIVE-RELATED 21 729 - -
Apr10g2067 732 Pfam Subtilase family 129 576 IPR000209 GO:0006508|GO:0008236
Apr10g2067 732 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
Apr10g2067 732 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Apr10g2067 732 PRINTS Subtilisin serine protease family (S8) signature 196 209 IPR015500 -
Apr10g2067 732 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Apr10g2067 732 SUPERFAMILY Subtilisin-like 107 588 IPR036852 GO:0004252|GO:0006508
Apr10g2067 732 Gene3D Peptidase S8/S53 domain 130 597 IPR036852 GO:0004252|GO:0006508
Apr10g2067 732 Gene3D - 601 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2067 Apr-Chr10 33435201 33439972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2067 12 729 Subtilisin-like Serine Gene Family AT3G46850 48.916 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2067 - - gmx:100795826 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2067 10 33435201 33439972 Apr10g2067 10 33435201 33439972 ECH
Apr9g1373 9 23348649 23352499 Apr10g2067 10 33435201 33439972 PCT