LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr10g2067	ATGGATGGTTATAGATTCTCCACCCTTTTGCTGCTCCTTCTTTGCTTTACTTCATTTCTTCATATATGTCACTCATCATCCCCAATGAAGAGTTACATTGTCTACACTGGCAACAGCATAAAGGATGCAGCTTCTGCGTTGACACTTTACACAAGCATGCTACAAGAAGTTGCTGACAGCAATGCTGAGCCCAAGTCGGTATTGCACTACTACAAACGTAGCTTTGGAGGCTTTGTTGCTAAGCTAACAGAGGAGGAAGCCAAAAGAATGGCTGGAGTTGATGGAGTGGTGTCTGTTTTTCCAAATGGAAAGAAACATCCTCATACAACAAGGTCATGGAATTTTATTGGCTTTCCATTACAAACACAGAGAGCACCAGCTGAGAGTGATGTCATCATTGGAGTAATTGACACTGGAATTTGGCCAGAATCTGACAGCTTCAAAGACAAAGGATTTGGTCCACCACCAAGTAAATGGAAGGGCACATGCCAAACTTCAAATTTCACCTGCAATAATAAAATCATTGGAGCTAAGTATTACAAACTTGATAAATCATTTTTTGATGAAGATCTAAAATCTCCAAGAGATTCAGAGGGTCATGGCACTCACACTGCATCAACAGCAGCTGGGAATTTGGTTAGCAATGCTAGCATGTTAGGCCTTGCAGAAGGAACAGCAAGAGGTGGCGCGCCATCGGCACGCATTGCCGTGTATAAAGTGTGTTGGTTTGATGGTTGTTCTGATGCAGACATACTTGCTGCATTTGATGATGCAATTGCGGATGGGGTTGACATAATATCACTTTCTATTGGAGGGTTCAGTGATGGAAACTACTTTACAGATGCATCATCCGTTGGAGCATTTCATGCTGTGAGAAATGGAATATTGACAGTAACTTCAGCAGGAAACAATGGGCCAAAACCTTCTTCCCTTTCAAATTATTCACCTTGGTTAATTGCTGTGGGTGCTACAACCATAGACAGAAAGTTTGTTACCAAGGTTGAATTAGGTAACAACATTACTTATGAGGGTACATCAATAAATTCATTTGACCTCAAGGGAAAATTGTATCCCATAATTTATGGTGGAGATGCTCCAAGCAAAGGCTTAGATGGATCTTTATCTCGGTTTTGCTTCAGTAGTTCATTGGACAAAAAGTTAGTTCAGGGCAAAATTGTTCTTTGTGAGGGCAGAAGCAAGGCAACAGGGCCTCTCTATGCTGATGCTGTTGGGGCCTTGATACAGGGTCAAAGTTATAAAGATCTTGCTCCCTCTCTTCCATTGCCTGGATCATACCTTGACTTGAAGGATGGTATCGCTGTATATGACTACATAAACTCTACAGGGGCTCCAACTGCAACCATACTTAAGAGTGATGAGATAAAAGATACTTTAGCCCCTGCTGTGGCCTCTTTCTCTTCAAGGGGTCCAAGCCTTGTTACACCTGAAGTTCTCAAGCCGGATTTAGTGGCTCCAGGAGTTGCCATTCTAGCTAGTTGGTCTCCACTTTCCTCCCCTTCTGAAATTGAAGGAGACAACAGAACATTACAGTTCAATATCATCACAGGAACTTCAATGGCTTGCCCACATGTTTCTGGTGCAGCAGCATATGTTAAATCTTTTCATCCAACATGGTCTCCTGCTGCTATTCGTTCAGCTCTAATGACCACAGCTAAACCACTTAGTCCCAAGACTAATCATGATGCAGAATTTGCATATGGCGCGGGCCAAATTGATCCTTTAAAGGCTGCTGACCCTGGTTTAGTATATGATGCTGGTGAAATAGACTATGTAAGGTTTTTATGTGGACAAGGCTATAGTTCAAGGAGTCTACAACTCATCACAGGGGATAAAAGTAGCTGCTCTGAAGCAACATATGGTACAGCAAGGGATCTAAACTATGCATCATTTGCTCTTCAAGTCCCACCCTCCAACACCACTGTTAGTGGAAGTTTTAAGAGAACCGTTACAAATGTTGGGTCATCAACATCCTCATATAAAGCTATTGTGACGGCTCCTCAAGGACTAAAAGTTGAAGTGAACCCAAGTGTTCTATCTTTCACTTCTCTTGGCCAAAAGCAAACATTTGTGCTCACAATTGATGGAACAATGGAAGAATCCAAGGTATCAGCCTCTTTGGTGTGGGATGATGGTAAATTCAAAGTGAGGAGCCCCATCATTGTGTTTAATACAGCATAA	2199	0.422	MDGYRFSTLLLLLLCFTSFLHICHSSSPMKSYIVYTGNSIKDAASALTLYTSMLQEVADSNAEPKSVLHYYKRSFGGFVAKLTEEEAKRMAGVDGVVSVFPNGKKHPHTTRSWNFIGFPLQTQRAPAESDVIIGVIDTGIWPESDSFKDKGFGPPPSKWKGTCQTSNFTCNNKIIGAKYYKLDKSFFDEDLKSPRDSEGHGTHTASTAAGNLVSNASMLGLAEGTARGGAPSARIAVYKVCWFDGCSDADILAAFDDAIADGVDIISLSIGGFSDGNYFTDASSVGAFHAVRNGILTVTSAGNNGPKPSSLSNYSPWLIAVGATTIDRKFVTKVELGNNITYEGTSINSFDLKGKLYPIIYGGDAPSKGLDGSLSRFCFSSSLDKKLVQGKIVLCEGRSKATGPLYADAVGALIQGQSYKDLAPSLPLPGSYLDLKDGIAVYDYINSTGAPTATILKSDEIKDTLAPAVASFSSRGPSLVTPEVLKPDLVAPGVAILASWSPLSSPSEIEGDNRTLQFNIITGTSMACPHVSGAAAYVKSFHPTWSPAAIRSALMTTAKPLSPKTNHDAEFAYGAGQIDPLKAADPGLVYDAGEIDYVRFLCGQGYSSRSLQLITGDKSSCSEATYGTARDLNYASFALQVPPSNTTVSGSFKRTVTNVGSSTSSYKAIVTAPQGLKVEVNPSVLSFTSLGQKQTFVLTIDGTMEESKVSASLVWDDGKFKVRSPIIVFNTA*	733

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Apr10g2067	732	CDD	PA_subtilisin_like	334	455	-	-
Apr10g2067	732	CDD	Peptidases_S8_3	105	558	IPR034197	-
Apr10g2067	732	Pfam	Fibronectin type-III domain	631	728	IPR041469	-
Apr10g2067	732	Gene3D	-	327	462	-	-
Apr10g2067	732	ProSiteProfiles	Serine proteases, subtilase domain profile.	112	584	-	-
Apr10g2067	732	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	21	729	IPR045051	-
Apr10g2067	732	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	19	108	IPR037045	-
Apr10g2067	732	Pfam	Peptidase inhibitor I9	31	103	IPR010259	-
Apr10g2067	732	PANTHER	PUTATIVE-RELATED	21	729	-	-
Apr10g2067	732	Pfam	Subtilase family	129	576	IPR000209	GO:0006508\|GO:0008236

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr10g2067	Apr-Chr10	33435201	33439972	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr10g2067	12	729	Subtilisin-like Serine Gene Family	AT3G46850	48.916	0.0	647

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr10g2067	-		-	gmx:100795826	1139.41

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr10g2067	10	33435201	33439972	Apr10g2067	10	33435201	33439972	ECH
	Apr9g1373	9	23348649	23352499	Apr10g2067	10	33435201	33439972	PCT

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