Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2045 ATGGAGGATTCTCAGTACTTGATGTGGATAAAGAGAAAACAAATCTTGAAGTCACATATTCAAGAACCCTTTGGAGCCAGCAACAACAACAACTCATCATGGGAGGAAAGAGCTTTTGCAGAAGATGCTGCTAGGATACTTGGTGGGTGTATATGGCCTCCAAGATCTTATTCATGTAATTTCTGTAAAAGAGAGTTTAGGTCTGCTCAAGCTCTAGGGGGCCACATGAATGTGCACAGGAGGGACAGGGCTAGGCTCAAACAAAGTCTTACCCCACATGATGAAGCCCTTCATCATCATCATCATCACAAAAATGATTTTACAACAACAAGCAAAGTCTCAACTATATCCCCCCAAGAAAATTGTTGTCAACCTATCATGTCTCCTTTTTCTTCTTCAATTGGCTGGGGACACCACCACATGGGGTCTCCTGATTCAGATCCAAAAGGGGTAGTCAAAGCAAGGGAAGAATGTTTGAAAGGTTTTGGTTGTAATGATTATGTTGAAACAAGTTTGTGTGTTGGGCAAAGTTCAGTGTTTGGCCAAAAATTACCGAGTGATGATTCATGTGGGGACGAAGCCTTCAGTTATAAAAAACCAAAGACTTCTATTTCTTCTTTGCCCGTCTTCCTCAAGCCATGTTCAAATGATAGACTCCTAACTTTCCAGTCTGCAGAATTTGTACTTGGACTTAAGCCTGGAAAGGAAGACTTGGACCTTGAACTCAGGCTTGGGAAACCACAGAAAGTTATTTAG 756 0.4167 MEDSQYLMWIKRKQILKSHIQEPFGASNNNNSSWEERAFAEDAARILGGCIWPPRSYSCNFCKREFRSAQALGGHMNVHRRDRARLKQSLTPHDEALHHHHHHKNDFTTTSKVSTISPQENCCQPIMSPFSSSIGWGHHHMGSPDSDPKGVVKAREECLKGFGCNDYVETSLCVGQSSVFGQKLPSDDSCGDEAFSYKKPKTSISSLPVFLKPCSNDRLLTFQSAEFVLGLKPGKEDLDLELRLGKPQKVI* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2045 251 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Apr10g2045 251 PANTHER OS07G0101800 PROTEIN 1 251 - -
Apr10g2045 251 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 251 - -
Apr10g2045 251 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Apr10g2045 251 Pfam C2H2-type zinc finger 57 81 - -
Apr10g2045 251 SUPERFAMILY beta-beta-alpha zinc fingers 54 84 IPR036236 -
Apr10g2045 251 SMART c2h2final6 57 79 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2045 Apr-Chr10 33262822 33263670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2045 28 89 C2H2 Transcription Factor Family AT2G37740 74.194 1.20e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2045 - - aprc:113851273 524.628