Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2036 ATGGCTTCAAACTCTCTCAACAATGGCGACAAAGAAGATTCTTCATCTTGGACAAGATGGCAGAACAAAAAGTTTGAAAACGCATTAGCATTGTATGATAAAGACACCCCAGATCGATGGCAAAATATAGCCAAAGAAGTTGGTGATAAATCAGTGGAGGAAGTGAAGAAACACTATGCAATTCTTTTAGAAGATATTCATAATATAGAGTCAGGGCATTTTCCAATTCCCGATTACAAGTCCTCACTTGGTGATGATGCACATAAAAAGGTTCCAACAAAGAATTCAGATCAAGGCAATTCCAAGAGCACAAGTTAA 318 0.3742 MASNSLNNGDKEDSSSWTRWQNKKFENALALYDKDTPDRWQNIAKEVGDKSVEEVKKHYAILLEDIHNIESGHFPIPDYKSSLGDDAHKKVPTKNSDQGNSKSTS* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2036 105 PANTHER PROTEIN RADIALIS-LIKE 3 1 82 - -
Apr10g2036 105 MobiDBLite consensus disorder prediction 74 105 - -
Apr10g2036 105 SMART sant 13 65 IPR001005 -
Apr10g2036 105 SUPERFAMILY Homeodomain-like 15 71 IPR009057 -
Apr10g2036 105 Pfam Myb-like DNA-binding domain 15 59 IPR001005 -
Apr10g2036 105 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 82 IPR044636 GO:0003700
Apr10g2036 105 CDD SANT 16 59 IPR001005 -
Apr10g2036 105 Gene3D - 9 76 - -
Apr10g2036 105 ProSiteProfiles SANT domain profile. 12 67 IPR017884 -
Apr10g2036 105 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2036 Apr-Chr10 33209912 33211105 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr10g2036 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2036 - - gmx:100788168 130.183