Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g2033 | ATGGCCTTCTTCTCCCCCCTTATTCTGCTTCTTCCTTCTCTTACAATTACCCTTCTCATTATTCTCCTCCAAATCCAGACAAGGGCCTCTTCTCTCTCATCTTCCCCACAAAATCTCCTCGTTTTGCCTTTAAAAACCCAGACACTCCCACATGGCTATGTCTCGGTTCAAAGGCCTTCTTCACGTAGGCTCTCTTTCCATCACAACGTAACCTTAACAGTTTCACTAACCGTAGGGTCGCCCCCACAAAGCGTTACCATGGTCCTCGACACAGGGAGTGAACTCTCATGGCTACACTGCAAAAAGTTCCCAAATTTAAACAACCCCATTTTCAACCCACTCCTTTCTTCCTCATACACCCCCACACCATGCACCTCACCCGTTTGCAAAACCCGGACCCGGGATTTCTCCATACCCGTTTCTTGTGACCCGAGGAAACTCTGCCATGCCACCGTCTCCTACGCCGACGCCACCTCCATCGAAGGCAACCTCGCCGCCGACACATTCTTCATCGGTGGGTCGGGTCAACCCGGAACCATATTCGGATGCATGGATTCCGGGTTTAGCTCCAATACCAACGAGGACTCCAAAACAACCGGGTTAATGGGCCTGAACCGCGGGTCACTCTCGTTCGTGACCCAAATGGGCCTTCCCAAATTCTCGTACTGCATCTCCGGCCACGACTCCTCCGGCGTGTTGCTCTTCGGCGACGCCACGTTCTCATGGGTTGGACCCTTGAAGTACACGCCACTCGTCAAAATCAACACCCCATTACCCTACTTCGACCGGGTCGCATACACGGTCCGGCTGGAGGGAATTCGGGTCGGGTCAAAACAACTACAGGTACCTAAGTCGATTTTCGCGCCTGATCATACAGGTGCGGGTCAAACCATGGTGGATTCGGGTACCCAGTTCACGTTTCTTCTCGGACCGGTTTACACCGCTTTGAGGAACGAGTTCGCGGCACAAACGAAAGGGGTGCTGACCCTTTTGGAGGATCCGAATTTCGTGTTTCAGGGAGCGATGGATTTGTGTTTTCGGGTGAAGTCGGGTCTCCCGGCGTTACCGGCGGTGACGTTGGTGTTTGATGGGGCGGAGATGAGTGTTTCCGGTGAGAGGTTGTTATATCGGGTGGATGACGTGGCAAAGGGCGGTAGTAATAGTGTGTATTGTTTCACGTTTGGGAACTCAGACTTGTTGGGAATAGAGGCATATGTTATTGGGCATCATCAACAGCAGAACGTGTGGATGGAGTTTGATTTGGTCAACTCTAGAGTTGGATTTGCTGACACTAAGTGTGAACTTGCTAGTCAACGACTAGGTTTGGGTCCTTTTTAG | 1338 | 0.5172 | MAFFSPLILLLPSLTITLLIILLQIQTRASSLSSSPQNLLVLPLKTQTLPHGYVSVQRPSSRRLSFHHNVTLTVSLTVGSPPQSVTMVLDTGSELSWLHCKKFPNLNNPIFNPLLSSSYTPTPCTSPVCKTRTRDFSIPVSCDPRKLCHATVSYADATSIEGNLAADTFFIGGSGQPGTIFGCMDSGFSSNTNEDSKTTGLMGLNRGSLSFVTQMGLPKFSYCISGHDSSGVLLFGDATFSWVGPLKYTPLVKINTPLPYFDRVAYTVRLEGIRVGSKQLQVPKSIFAPDHTGAGQTMVDSGTQFTFLLGPVYTALRNEFAAQTKGVLTLLEDPNFVFQGAMDLCFRVKSGLPALPAVTLVFDGAEMSVSGERLLYRVDDVAKGGSNSVYCFTFGNSDLLGIEAYVIGHHQQQNVWMEFDLVNSRVGFADTKCELASQRLGLGPF* | 446 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g2033 | 445 | CDD | pepsin_A_like_plant | 71 | 433 | IPR034161 | - | |
Apr10g2033 | 445 | PANTHER | EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN | 16 | 442 | - | - | |
Apr10g2033 | 445 | SUPERFAMILY | Acid proteases | 72 | 433 | IPR021109 | - | |
Apr10g2033 | 445 | Pfam | Xylanase inhibitor N-terminal | 74 | 237 | IPR032861 | - | |
Apr10g2033 | 445 | ProSiteProfiles | Peptidase family A1 domain profile. | 72 | 429 | IPR033121 | - | |
Apr10g2033 | 445 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 87 | 98 | IPR001969 | GO:0004190|GO:0006508 | |
Apr10g2033 | 445 | Gene3D | Acid Proteases | 58 | 237 | IPR021109 | - | |
Apr10g2033 | 445 | PRINTS | Pepsin (A1) aspartic protease family signature | 78 | 98 | IPR001461 | GO:0004190|GO:0006508 | |
Apr10g2033 | 445 | PRINTS | Pepsin (A1) aspartic protease family signature | 236 | 249 | IPR001461 | GO:0004190|GO:0006508 | |
Apr10g2033 | 445 | PRINTS | Pepsin (A1) aspartic protease family signature | 297 | 308 | IPR001461 | GO:0004190|GO:0006508 | |
Apr10g2033 | 445 | Pfam | Xylanase inhibitor C-terminal | 265 | 429 | IPR032799 | - | |
Apr10g2033 | 445 | Gene3D | Acid Proteases | 241 | 438 | IPR021109 | - | |
Apr10g2033 | 445 | PANTHER | ASPARTYL PROTEASE-RELATED | 16 | 442 | IPR001461 | GO:0004190|GO:0006508 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g2033 | Apr-Chr10 | 33186715 | 33188355 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g2033 | 32 | 434 | Miscellaneous Gene Families | AT1G44130 | 23.434 | 6.95e-18 | 83.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g2033 | - | - | gmx:100783835 | 681.789 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr9g1347 | 9 | 23103584 | 23104717 | Apr10g2033 | 10 | 33186715 | 33188355 | ECH | |
Apr4g1914 | 4 | 27126600 | 27128789 | Apr10g2033 | 10 | 33186715 | 33188355 | ECH | |
Apr10g2033 | 10 | 33186715 | 33188355 | Apr10g2033 | 10 | 33186715 | 33188355 | ECH |