Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2031 ATGGGTGATGCAATTGATTTGACTGGTGATGGAGGTGTCATTAAGACCATTGTGAGAAAAAGCAAACCCGATGCTGTTGCTCCAACAGAAAATTTACCTCTTGTTGATGTTCATTATGAAGGCACACTTGCTGATACTGGTGAAGTTTTTGACACCACGCATGAAGATAACACTGTCTTCTCTTTTGAGCTTGGAAAGGGCAGTGTTATTAAGGCCTGGGAAGTTGCAGTGAAAACCATGAAGGTTGGAGAAATTGCAAAAATAATTTGCAAGCCAGAATATGCATATGGCAGTGCAGGATCTCCTCCAGATATTCCTCCAGATGCAACACTTGTTTTTGAAATTGAGCTAGTTACTTGTCGGCCAAGGAAGGGCTCCAGTTTGGGAAGTGTTTCGGAGGAGAGGGCTAGGCTAGATGAGCTGAAGAAGCAGAGAGAGCTAGCTGCTGCTGCCAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAGCAAAAGCTGCTGCGGCTGCGCGTGTGCAGGCCAAGTTAGAAGCTAAGAAAGGTCAAGGAAAGGGTAAAGGTAAAGCTAAGTAG 567 0.4497 MGDAIDLTGDGGVIKTIVRKSKPDAVAPTENLPLVDVHYEGTLADTGEVFDTTHEDNTVFSFELGKGSVIKAWEVAVKTMKVGEIAKIICKPEYAYGSAGSPPDIPPDATLVFEIELVTCRPRKGSSLGSVSEERARLDELKKQRELAAAAKEEEKKKREEAKAAAAARVQAKLEAKKGQGKGKGKAK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2031 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Apr10g2031 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1 1 188 - -
Apr10g2031 188 SUPERFAMILY FKBP-like 8 118 - -
Apr10g2031 188 Coils Coil 131 170 - -
Apr10g2031 188 MobiDBLite consensus disorder prediction 149 188 - -
Apr10g2031 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Apr10g2031 188 MobiDBLite consensus disorder prediction 149 166 - -
Apr10g2031 188 Gene3D - 2 120 IPR046357 GO:0003755
Apr10g2031 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2031 Apr-Chr10 33175793 33179062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2031 4 155 Calmodulin-binding Proteins AT5G48570 33.758 4.36e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2031 K01802 - gmx:100500018 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2031 10 33175793 33179062 Apr10g2031 10 33175793 33179062 ECH