Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2030 ATGACTTTTAGCAAAAGAATGCTATGCTTCATCATTTTTACTTGTTTCATGCACTTGACAAAGTCTTCAAACTCGAGAAAAGACACACTTCTCCAAGGTTATCAGCTTGCAGCAACCAACCATTTGATTTCATCTTCTGGTGTGTACACATTGCGTTTCTTTCAGCTTGATGGCTCTGAAGATAACAGCAAATTCTACCTTGGAATATCGTTCAATAATTACTATGTTTGGGTTGCAAATAGAGATAATCCAATCCATGATGATCCTGGAGTTCTCACAATTGATGAATGTGGCAATCTGAAAATTTTGTGCATTACCACTATCATGCTATATTCGACAGAAGCTGCAAGAAACAAAAGTGTTAGTGCCACTTTGCTAGACACGGGGAACTTTGTGCTTCATGAATTAAACTCAAACAGGTCTGTGAAAAGGGTATTATGGCAGAGCTTTGATTACCCCATGGACACACTTGTACCAGGGATGAAGATTGGGTATGACAAGCTCACGGGTCATACTTGGTCTTTAACGGCAAGGAGAAGTTTTAAATCTCTTTGGTCAGGGTCTTTCTCTCTTAGACTTGACCTCAAAACAAACCAATTGGTTAGTAGGTGGAGAGGGACCATAGTTTGGAGTAGTGGACCATGGAGAAATGGAAGTTTCATCAACTTAAACTCATACAAAGAGCAATTCAATTTCACTTTTTTTTCGAATGAAAATGTAACCTACTTTGAATATGCTTCAAGTTCTAGTCATATGACAATGGGACCATTGGGTACATTGAATGCCAGTGGTGTCTCTTACTCATGTGTTGATGGTGACATTCCCCCTGGTTGTTCAATGCCAAGGCCTTCAAAATGTAGGGAAGATGATGATTTGTACTTGCCCAATTGGAATAGCATTGGGGCAATGTCAAGGAAAGGGTTCATATTTGATGAAAGTGAGAACTTGACCATTTCTGATTGTTGGATGAAATGCTTGAGTAATTGTTCCTGTGAGGCCTACACTTACGCAAATCAGGATGCAACTGGTTGCGAGATATGGACTAAGGGAACAGCACACTTTGTTGCGACTGATTCCGCTATTGGGCGTCCAATTTTTTTCTTTCGTACTGAAACCAAAGCAACCGAAAAGAAATCAAGTCAATCCTCTATCATTGGAGAAAACATTGAAATTTCTGTTCCAAACGATGAAGGAAGAGAACAGTGGAAAAAGAAAAGGACAGGTGGTGGTATGCATATATTTGACTTTACAACCATTCTTGAGGCAAGTGACAATTTTTCTTGCACAAATAAGATTGGGGAGGGTGGCTTTGGACCTGTCTACAAGGGAAAGTTGTCAAATGGTCAAGAAATAGCTATAAAGAGACTTTCCAAAAGCTCAGGACAAGGTTTGATAGAGTTCAAAAATGAAGCTATGTTAGTTGTGAAACTCCAACACACTAATCTAGTGAGACTGCTAGGTTGTTGCACTGACAGAGAAGAAAGAATATTAGTTTATGAATTCATGTCCAACAGAAGCTTGAATTTATACCTCTTCGACTCCAACAAAAGAAATGTGTTAGAATGGAACACACGGTACAAAATTATTGAAGGAGTTACACAGGGACTTGTGTATTTACATCAATATTCGCGATTAAAAGTGATACACAGGGACTTAAAAGCCAGCAATATTTTACTGGACAATGAATTGAATCCAAAAATATCCGATTTTGGGATGGCTAGGATATTTGGATTGTCAGAATCTGAAGAAAAAACTAATAGAGTTGTTGGGACATTTGGATATATGTCTCCCGAATATGCTATGAGAGGTGTCATCTCAACCAAAACTGATGTATATAGTTTCGGCATCTTGCTTCTAGAGATTGTGAGTGGAAAGAAAAATAATTGTAATTACCCGCTCAATCTTCTTGGATATGCTTGGCAATTATGGAACCATGGAGAAGCTCTCAAGCTAATCGACTCAACGATAAATGGGTCATGCCTTCAGATCCAAGTATTACGATGCATACATGTAGGTCTGTTATGCACTCAAGATCGACCAAGGGATAGGCCAACTATGCTTGAGGTCATTTCTTTTCTTTCAAATGAAATCATTCAATTACCACAACCCATACAACCATCATTTTATACCATTACAAATATGAAGGAACTAGAGCAAAATAAAAGCTCTTCCGTCAATGAGATAACAATTTCAGACACATCAGGTAGATAA 2211 0.384 MTFSKRMLCFIIFTCFMHLTKSSNSRKDTLLQGYQLAATNHLISSSGVYTLRFFQLDGSEDNSKFYLGISFNNYYVWVANRDNPIHDDPGVLTIDECGNLKILCITTIMLYSTEAARNKSVSATLLDTGNFVLHELNSNRSVKRVLWQSFDYPMDTLVPGMKIGYDKLTGHTWSLTARRSFKSLWSGSFSLRLDLKTNQLVSRWRGTIVWSSGPWRNGSFINLNSYKEQFNFTFFSNENVTYFEYASSSSHMTMGPLGTLNASGVSYSCVDGDIPPGCSMPRPSKCREDDDLYLPNWNSIGAMSRKGFIFDESENLTISDCWMKCLSNCSCEAYTYANQDATGCEIWTKGTAHFVATDSAIGRPIFFFRTETKATEKKSSQSSIIGENIEISVPNDEGREQWKKKRTGGGMHIFDFTTILEASDNFSCTNKIGEGGFGPVYKGKLSNGQEIAIKRLSKSSGQGLIEFKNEAMLVVKLQHTNLVRLLGCCTDREERILVYEFMSNRSLNLYLFDSNKRNVLEWNTRYKIIEGVTQGLVYLHQYSRLKVIHRDLKASNILLDNELNPKISDFGMARIFGLSESEEKTNRVVGTFGYMSPEYAMRGVISTKTDVYSFGILLLEIVSGKKNNCNYPLNLLGYAWQLWNHGEALKLIDSTINGSCLQIQVLRCIHVGLLCTQDRPRDRPTMLEVISFLSNEIIQLPQPIQPSFYTITNMKELEQNKSSSVNEITISDTSGR* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2030 736 PIRSF SRK 1 263 IPR024171 GO:0004674
Apr10g2030 736 PIRSF SRK 387 736 IPR024171 GO:0004674
Apr10g2030 736 PIRSF SRK 267 394 IPR024171 GO:0004674
Apr10g2030 736 CDD STKc_IRAK 432 693 - -
Apr10g2030 736 Pfam D-mannose binding lectin 75 179 IPR001480 -
Apr10g2030 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Apr10g2030 736 Gene3D Transferase(Phosphotransferase) domain 1 502 701 - -
Apr10g2030 736 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 73 732 - -
Apr10g2030 736 CDD B_lectin 40 153 IPR001480 -
Apr10g2030 736 Gene3D - 22 150 IPR036426 -
Apr10g2030 736 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Apr10g2030 736 ProSiteProfiles PAN/Apple domain profile. 286 372 IPR003609 -
Apr10g2030 736 SMART ntp_6 288 370 IPR003609 -
Apr10g2030 736 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 216 IPR036426 -
Apr10g2030 736 Pfam PAN-like domain 314 349 IPR003609 -
Apr10g2030 736 SMART serkin_6 426 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2030 736 Pfam Protein tyrosine and serine/threonine kinase 428 693 IPR001245 GO:0004672|GO:0006468
Apr10g2030 736 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 732 - -
Apr10g2030 736 ProSiteProfiles Protein kinase domain profile. 426 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2030 736 SUPERFAMILY Protein kinase-like (PK-like) 410 723 IPR011009 -
Apr10g2030 736 SMART blect_4 27 153 IPR001480 -
Apr10g2030 736 Gene3D Phosphorylase Kinase; domain 1 400 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2030 Apr-Chr10 33127932 33131461 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2030 413 724 Receptor kinase-like Gene Family AT4G23190 54.545 4.26e-119 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr10g2030 PK_Tyr_Ser-Thr 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2030 - - gmx:100782230 1164.06