Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2029 ATGGTTTTCAGTGGAAGTGCACTATGTTTCATAACTTTCACTTGTTTCTTGCACTTAGCAAAGCCTTCAAGCGTGAACCAAGACACTTTATTCCAGGGTAATAATCTCACAACAACTAAAAGCCTGATTTCATCTTCAGGTTTAATCACTCTGTGTTTCTTTCAGTTGGGTGGCTCTAAAGATTTTTATCTTGGAATTAGACTATCATCTCGCAATTCAAGTTCTGATTATTTTTGGATAGCCAATAGAGACACGCCAATCCAAGACCCTTCAGGGTATCTCACAATAGATGAACATGGTAACATGAAAATTATTTCCGACAAGGGAAATTCAAATCCCACTATCATGCTCTATTCTGCTGAAGCGGCAAGTAACAAGAACAATACTATTGGTGCCATCCTTGAGGACACTGGTAACTTCATGCTTCGTGAGATGAATCCAGATGGGTCAGTTAAAGGGGTATTATGGCAAAGCTTTGATCACCCCTCAGACACACTTATACCTGGGATGAGACTTGGATTTGATAGAAAAACAGGCTATAATTGCTCTTTAACATCATGGAGAAGTGGTGTGTCTCCTTTGTCAGGGTCTTTCGCACTTGGGATTGATCCCAAAACAAATGAACTAGTGATGTGGTGGACAGGAATGATTGTTTGGAGTAGTGGAAAATGGAACAATGGAACTTTTGAAAATTTACAATCATCACTATTCAAAAGTGACTTCAGTTTTGAGTACTTTTCAAATGAAAATGTAACATATGTAAAATATGGTCGAAACCCAACATATGGTTGGATTTCCTTAGGATCTTTGGGTGCAATAGTTGGAAGCAGTGGTAACTCTTATTCATGCACTAATCGGTACTTTCTCGATGGTTGTTCAATGCCAATTCCACCTAAATGTAGGGACCAAGATAGTTTATACTTGGGCACGTGGAGTAGCTACGGGGTCATGTTAGGGAATGGGTTCAAATTTGATGAAAAGGACAACTTGACTAATTTTGATTGTTGGATGAAGTGCTTGAATAATTGCTCTTGTGAAGCCTACTCTTATGTTAATCAGGATCAAACTGGCTGCGAGATATGGAGCAATGGCACAACCAGCTTTCAAGCCTCTGATAATTTCATGGCTGAGGGGCGACAAATTTACTTCATTCGCACAGGACAAGGCAAGAATATTAGAAGGATACGGATCATAGCTGCAATATGTGGACCTCTTCTCTTTATCATCTTGTGCTTCACGTGCATTAAGTTGTGGAGAAAACGCAAAGAAAGAGCTGAAAAGCGTATGAAGCAAATAAACCCATTATCTAGTATTGAAAGAAACATTGCAAATTCCCCTGACTATGGTGAAAAAAGAAAAGAGAGGAATGACGGAATGACGAGTGATGATACACATAGATTCGACTTTCAAACTATTCTTGAGGCAACTGCTAATTTTTCACCCACCAATAAGATAGGGGAGGGTGGCTATGGACCTGTCTATAAGGGGAAACTGGCAAATGGACAAGAAATAGCTATAAAGAGACTTTCGAAAAGCTCAGGACAGGGATTGATAGAGTTCAAAAATGAAGTGATGCTAATAGTCAAACTCCAGCACACTAATCTAGTGAGGCTTCTTGGTTTTTGTATCGACAGAGAAGAAAGAATATTAGTCTATGAGTACATGCCCAATAATAGCTTGAATTTATATCTCTTCGATTCCAACAAAAGAAACGTGTTGGAATGGAATGTACGACGTACAATTATTGAAGGAGTTGCACAAGGACTTGTGTATTTACATCAATATTCAAGATTGAAAGTGATACATAGAGACTTGAAAGCTAGCAACATTTTACTTGACAATGAGTTGAATCCAAAAATATCTGACTTTGGAATGGCTAGAATACTTGAATTGACAAAAACAGAAGAAAAAACTAATAGAATTGTTGGAACATATGGCTATATGTCTCCAGAGTATGCTATGATGGGTGTCATCTCAACTAAAGTTGATGTTTATAGCTTTGGCATCCTATTGCTGGAGGTTGTGAGCGGAAAGAAAAATAGTGATGATTACCCACTAAATCTTGTAGTTTATGCGTGGAAACTATGGAATGAAGGCGAAGCACTAAAGCTAATGGACACAATGTTGGATGGGTCATACCCTTCTTTCCAAGTGTTACGCTACATTCATATTGGTCTCTTATGCACTCAAGATCAAGCAAGAGCCAGACCCACTATGCTTGAGGTTGTTTCTTTTCTGTCAAATGAAAATGCCCAATTATCTCCACCTAAAAAACCAGGATTTTGTACCATTGAAACCAAGAAAGAAATTGGGCAGCATAAAAGTTATTCCGTAAATGAGACAACAATTTCATTGTCATCAGGTAGATAA 2370 0.3831 MVFSGSALCFITFTCFLHLAKPSSVNQDTLFQGNNLTTTKSLISSSGLITLCFFQLGGSKDFYLGIRLSSRNSSSDYFWIANRDTPIQDPSGYLTIDEHGNMKIISDKGNSNPTIMLYSAEAASNKNNTIGAILEDTGNFMLREMNPDGSVKGVLWQSFDHPSDTLIPGMRLGFDRKTGYNCSLTSWRSGVSPLSGSFALGIDPKTNELVMWWTGMIVWSSGKWNNGTFENLQSSLFKSDFSFEYFSNENVTYVKYGRNPTYGWISLGSLGAIVGSSGNSYSCTNRYFLDGCSMPIPPKCRDQDSLYLGTWSSYGVMLGNGFKFDEKDNLTNFDCWMKCLNNCSCEAYSYVNQDQTGCEIWSNGTTSFQASDNFMAEGRQIYFIRTGQGKNIRRIRIIAAICGPLLFIILCFTCIKLWRKRKERAEKRMKQINPLSSIERNIANSPDYGEKRKERNDGMTSDDTHRFDFQTILEATANFSPTNKIGEGGYGPVYKGKLANGQEIAIKRLSKSSGQGLIEFKNEVMLIVKLQHTNLVRLLGFCIDREERILVYEYMPNNSLNLYLFDSNKRNVLEWNVRRTIIEGVAQGLVYLHQYSRLKVIHRDLKASNILLDNELNPKISDFGMARILELTKTEEKTNRIVGTYGYMSPEYAMMGVISTKVDVYSFGILLLEVVSGKKNSDDYPLNLVVYAWKLWNEGEALKLMDTMLDGSYPSFQVLRYIHIGLLCTQDQARARPTMLEVVSFLSNENAQLSPPKKPGFCTIETKKEIGQHKSYSVNETTISLSSGR* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2029 789 SMART serkin_6 479 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2029 789 PIRSF SRK 273 789 IPR024171 GO:0004674
Apr10g2029 789 PIRSF SRK 1 270 IPR024171 GO:0004674
Apr10g2029 789 Pfam PAN-like domain 329 363 IPR003609 -
Apr10g2029 789 Gene3D - 23 159 IPR036426 -
Apr10g2029 789 ProSiteProfiles Bulb-type lectin domain profile. 27 155 IPR001480 -
Apr10g2029 789 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 191 IPR036426 -
Apr10g2029 789 Pfam Protein kinase domain 482 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2029 789 ProSiteProfiles Protein kinase domain profile. 479 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2029 789 SMART ntp_6 306 386 IPR003609 -
Apr10g2029 789 MobiDBLite consensus disorder prediction 445 462 - -
Apr10g2029 789 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 75 769 - -
Apr10g2029 789 MobiDBLite consensus disorder prediction 441 462 - -
Apr10g2029 789 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 769 - -
Apr10g2029 789 Gene3D Phosphorylase Kinase; domain 1 443 554 - -
Apr10g2029 789 SMART blect_4 34 162 IPR001480 -
Apr10g2029 789 SUPERFAMILY Protein kinase-like (PK-like) 463 768 IPR011009 -
Apr10g2029 789 Gene3D Transferase(Phosphotransferase) domain 1 555 758 - -
Apr10g2029 789 CDD B_lectin 34 162 IPR001480 -
Apr10g2029 789 ProSiteProfiles PAN/Apple domain profile. 300 387 IPR003609 -
Apr10g2029 789 Pfam D-mannose binding lectin 78 188 IPR001480 -
Apr10g2029 789 CDD STKc_IRAK 485 746 - -
Apr10g2029 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Apr10g2029 789 Pfam Domain of unknown function (DUF3403) 748 789 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2029 Apr-Chr10 33120379 33124778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2029 450 783 Receptor kinase-like Gene Family AT3G45860 51.906 1.56e-116 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr10g2029 Pkinase 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2029 - - gsj:114396075 1102.81