Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2019 ATGGAAGAGTGTTGGATGCCAACTTCTGCGTCTGCGTCTGCGTCTGCGTCTGAATTCGAACCATGCAATGGTATTAAACGTGGAAACTTTGCCCAAGACGAAGAAGACCTTATCATCAAGCTCCATGCCCTCCTTGGCAACCGGTGGTCACTTATAGCTGGAAGGTTGCCAGGACGTACAGACAATGAGGTCAAGAACTATTGGAATTCTCACATCCGAAGAAAGTTACTTCAAATGGGAATTGATCCAAATAACCACAAGATACACCATAGTGTTCCTATTCCACATACCCATGGCCACCGTGTTTCAAATGCCATTGAACCATCATCATCTGGGTCCATGCACAAAGAACAGAGAGACCATTTCATCAAATCCTATGCTTCCACAAATGAGAGGATTTCAGACACATATAGTTGCCTTGTTGAAGAACCAACACTGGTTTCTTCAGCATCCCATTTGAATCTTGACTTAACCATTGCTTTCCCTTCACCTAAACCAGCTCTTGTGAAAGATAAGTCTAAGCCAACTTCTGTCTGCACGAACACAAGTAACAGTGATGAGGATCCCGTTCTTACCCTTCCTTTGTTTCAATGA 594 0.4377 MEECWMPTSASASASASEFEPCNGIKRGNFAQDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLLQMGIDPNNHKIHHSVPIPHTHGHRVSNAIEPSSSGSMHKEQRDHFIKSYASTNERISDTYSCLVEEPTLVSSASHLNLDLTIAFPSPKPALVKDKSKPTSVCTNTSNSDEDPVLTLPLFQ* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2019 197 CDD SANT 29 72 IPR001005 -
Apr10g2019 197 SMART sant 26 74 IPR001005 -
Apr10g2019 197 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Apr10g2019 197 Gene3D - 29 92 - -
Apr10g2019 197 Pfam Myb-like DNA-binding domain 27 71 IPR001005 -
Apr10g2019 197 PANTHER MYB TRANSCRIPTION FACTOR 24 196 - -
Apr10g2019 197 ProSiteProfiles Myb-like domain profile. 26 72 IPR001005 -
Apr10g2019 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 76 IPR017930 -
Apr10g2019 197 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 24 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2019 Apr-Chr10 33051722 33055533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2019 25 117 MYB Transcription Factor Family AT1G22640 60.638 3.56e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr10g2019 Myb_DNA-binding 8.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2019 K09422 - aprc:113851262 403.675