Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2009 ATGGGTTTCTCCCAAGGAACCTGCACTGATTCCAGTGACCTTTCCGATGACCCAAATGCTTCATCTTTAGTTGCAGATCACTACTGTGACTACGACAAGCTCAAATTTACAACCTTTTTGAGAAAAATGATATGGGAATTTGGCCTTGCCTGTGTTGCTAACCCTTCCCGTCGCCGGAGGAGCCAAAACGACGGCAACGGTCACAAGAAGACGAATTTGGAGCACAACAAGGCATGGTTGCTTGCGGAGTCTGGTGGGTGTGGAGCAGAACTGAGCAATGCTGACCCTCAATCGGTTCACTCTTCTTTCAGGTTCAGTTTCTGTTCTCAGGTTGAGTTGGAGTCGTTGAATATGAGTTCTTCCTCTGCTGCAACTGTTTTGATGGTGAATTTGGACAATGGGATGAGTGAATCACGCGCCAGGGAGCTCAAGTGCAGGAGAATGGAGTCATTGGAGAAAAGCATATCCCCTGTGGCTCACACTTTGATCAGGTTCAGCTATGCTGAAATTCTCTCTGCTACTAGGAATTTTTCCAAAGGTAGAGTGTTGGGGAGAGGGGCATTGAGCTGTGTTTTTAGGGGAAGAGTTGGGCTTTTGAGGACTGCTGTGGCAATTAAGCGATTGGACAAGGAAGATAAGGAATCTGCTAAGGCCTTTTGTAGAGAATTGATGATTGCAAGTTCTCTTCATAGTTCAAATGTTGTTCCTCTTCTGGGGTTTTGTATTGACTCGGAGGAGGGTTTGTTTTTGGTGTACAAGTATGTGTCAGGGGGAAGCTTGGAGCGCCACTTGCATGGGAGGAAGAAGGGTAGTTCACCACTTCCATGGCCTGTGAGGTACAAAGTTGCAATTGGGATTGCTGAAGCAGTGGCTTATCTGCATAGTGGAACTGAAAGATGTGTTGTTCATAGAGACATTAAGCCCTCAAATATTCTGCTTTCATCCAAGAAGACTCCCAAGCTATGTGACTTTGGATTAGCTACATGGACTTCTGCACCTTCTGTTCCTTTCCTTTGCAAAACTGTCAAAGGAACATTTGGATATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGACAAGACTGATGTTTATGCTTTTGGTGTGGTTTTATTGGAACTCATCACTGGCCGAAAGCCAATCGAAGCAAGAGGGTCTCCAGGAGAGGAGAACTTGGTCTTATGGGCTAAACCTTTTCTACTAAAAGGGAAAGGAGCCATTGAAGAGTTGATTGATCCTCAACTCAAGTGCAGTTTGAGATTCTCAAATCAAATGGGTAGAATGATTGAAGCAGCAGCTGCCTGTGTCACAAATGAAGAATCTCGGAGACCTGGCATACATGAGATTATTGCAATACTGAAAGGTGAAGAAGAACCTCTTTTCTCTAAAAGAAAGAAGTCCAGTTTTCTTGGGAATGGATGCGTGATTGATTGTTATTCTCAATTACAACAAACAAATAATGAGATGAAAAGTCACTTGGCTTTGGCAATGCTAGGAGTTGCAGAATTTGAGGATGATGATTATCTCTATGGTCGATAA 1542 0.439 MGFSQGTCTDSSDLSDDPNASSLVADHYCDYDKLKFTTFLRKMIWEFGLACVANPSRRRRSQNDGNGHKKTNLEHNKAWLLAESGGCGAELSNADPQSVHSSFRFSFCSQVELESLNMSSSSAATVLMVNLDNGMSESRARELKCRRMESLEKSISPVAHTLIRFSYAEILSATRNFSKGRVLGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFCRELMIASSLHSSNVVPLLGFCIDSEEGLFLVYKYVSGGSLERHLHGRKKGSSPLPWPVRYKVAIGIAEAVAYLHSGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEARGSPGEENLVLWAKPFLLKGKGAIEELIDPQLKCSLRFSNQMGRMIEAAAACVTNEESRRPGIHEIIAILKGEEEPLFSKRKKSSFLGNGCVIDCYSQLQQTNNEMKSHLALAMLGVAEFEDDDYLYGR* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2009 513 PANTHER OS01G0750732 PROTEIN 1 511 - -
Apr10g2009 513 Gene3D Transferase(Phosphotransferase) domain 1 255 469 - -
Apr10g2009 513 Gene3D Phosphorylase Kinase; domain 1 137 254 - -
Apr10g2009 513 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 1 511 - -
Apr10g2009 513 ProSiteProfiles Protein kinase domain profile. 177 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2009 513 SUPERFAMILY Protein kinase-like (PK-like) 157 455 IPR011009 -
Apr10g2009 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Apr10g2009 513 SMART serkin_6 177 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g2009 513 Pfam Protein kinase domain 178 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2009 Apr-Chr10 32974119 32977123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2009 165 457 Trihelix Transcription Factor Family AT1G70460 42.712 8.92e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Apr10g2009 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2009 - - gmx:100786826 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2009 10 32974119 32977123 Apr9g1321 9 22856015 22859546 PCT