Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1971 ATGGTTCTCTCGAAAACTGCCTCCGAGACCGACGTCTCCGTCCATTCAACCTTCGCTTCTCGCTATGTCAGGACTTCGCTTCCAAGGTTCAAGATGCCTGAAGAATCGATACCAAAGGAAGCAGCGTTTCAGATCATAAACGATGAGCTAATGTTGGATGGGAATCCAAGGCTGAACCTGGCATCGTTTGTGACAACTTGGATGGAACCAGAATGTGACAAACTCATCATGGCTTCCATTAACAAAAACTATGTTGACATGGATGAGTACCCTGTCACCACTGAGCTACAGAATCGGTGTGTTAATATGATAGCTCATCTTTTTAATGCACCACTTGAGGAGTCACAGGCTGCAATTGGTGTTGGCACTGTTGGCTCATCAGAGGCCATAATGTTGGCTGGGTTGGCGTTCAAAAGGAAGTGGCAGAACAGAAGGAAAAAGGAGGGAAAGCCTTATGACAAGCCCAACATTGTCACTGGAGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCTAGGTACTTCGAGGTAGAATTAAAAGAGGTGAAGCTGCGTGATGGATACTATGTAATGGATCCTGAAAAGGCCGTCGAATTGGTGGATGAGAACACCATTTGTGTTGCTGCTATCCTTGGTTCCACACTGAATGGAGAGTTTGAAGATGTCAAACGCTTAAACGATCTCCTAATTGAAAAGAATAAGGAAACTGGATGGGACACTCCTATTCATGTGGATGCAGCCAGTGGTGGGTTCATTGCCCCATTTATTTACCCAGAGCTTGAGTGGGACTTCCGGTTACCACTAGTGAAGAGCATCAATGTTAGTGGCCATAAGTATGGTCTAGTCTATGCTGGAATCGGTTGGGTTATCTGGAGAAGCAAGGAGGACTTGCCTGAGGAACTGATCTTCCACATCAACTATCTTGGAGCTGATCAACCCACCTTCACCCTTAACTTCTCCAAAGGTTCTAGCCAAGTCATTGCTCAATACTACCAACTAATTCGCCTTGGTTTTGAGGGATATAGAAACGTGATGGAAAATTGTAGAGACAACATGATAGTGCTGAAAGAGGGACTAGAGAAAACGGGGCGTTTTGAAGTAGTGTCGAAAGACAACGGTGTGCCATTGGTGGCATTCACATTGAAAGATCACACCCACTTTGATGAATTCCAAATCTCTGACTTGCTAAGGCGCTTTGGGTGGATAGTGCCAGCATACACAATGCCCCCAGATGCTCAACACGTGACTGTGCTTCGTGTTGTGATAAGAGAGGACTTCTCAAGAACCCTTGCGGAGCGTCTTGTGGTTGATGTTGAGAAAGTTTTGCATGAACTTGATTCACTTCCAGCTAGGATTATTAGTAGCACCACCACTACTGTAACAGTTAATGGAGATGATGCAAATAATGGCAAAGTAGTTGCTAAAAAGAGTGCTATTGAGACCCAACGGGAAATCACTGCGGTTTGGAAGAAGTTTGTGTTGGAGAGGAAAAAGCTCAATGAAAAGATGAATGGTGTTTGTTAG 1521 0.4477 MVLSKTASETDVSVHSTFASRYVRTSLPRFKMPEESIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESQAAIGVGTVGSSEAIMLAGLAFKRKWQNRRKKEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVELVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCRDNMIVLKEGLEKTGRFEVVSKDNGVPLVAFTLKDHTHFDEFQISDLLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVVDVEKVLHELDSLPARIISSTTTTVTVNGDDANNGKVVAKKSAIETQREITAVWKKFVLERKKLNEKMNGVC* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1971 506 PANTHER GLUTAMATE DECARBOXYLASE 1 506 - -
Apr10g1971 506 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Apr10g1971 506 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Apr10g1971 506 Gene3D - 66 360 IPR015421 GO:0003824
Apr10g1971 506 CDD DOPA_deC_like 59 439 - -
Apr10g1971 506 Gene3D - 361 448 - -
Apr10g1971 506 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Apr10g1971 506 Gene3D - 1 65 - -
Apr10g1971 506 PANTHER GLUTAMATE DECARBOXYLASE 1 506 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1971 Apr-Chr10 32624988 32632397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1971 1 506 Calmodulin-binding Proteins AT5G17330 83.399 0.0 892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1971 10 32624988 32632397 Apr9g1278 9 22422487 22429097 PCT