Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1967 ATGGCGCCTGTTTCATTGCCTCCAGGGTTTAGATTCCACCCCACCGATGAAGAACTCGTTTCTTATTACCTCAAAAGAAAGATAAATGGTCGTAAGATTGAGTTGGAAATCATCCCTGAAGTTGATCTTTATAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTTAGCCCTCGAGATAGGAAGTACCCAAATGGATCAAGAACCAATCGTGCAACAAAATCTGGATATTGGAAGGCCACAGGGAAAGATCGTAAGGTGAATTCTCAAACTCGTGCAATAGGAATGAAGAAAACCTTAGTTTATTATCGAGGTAGGGCACCACATGGTTCTCGTACAGGTTGGGTTATGCATGAGTACCGTCTTGATGAGAGGGAATGTGAAACTGCTTCAGGCTTGCAGGACGCATATGCTCTATGTCGTGTGTTCAAGAAAACTGTAGTGATTGCACCAAAAGTTGGAGAGCACTATGTTAATGTGACAAGCCATGCAAATCAGATTACAAGCGATCAATCATCAAGCATTGAGCTATACTCTGATGGAAGAGGTGAAGTTTTAGAAAGCTCAAATTATTTGATGCCGTGGGATACATGTTCATCGCAAAACATAAATAGGACCAATGCCAATATTAATGGTGGGACAAGGGATAATGAGACATGGACACATTTTTTATCAGAAGACTTACTCAATCTTCCAACATCTTCTTCATTTCCCAATTATGGAAGCATGACTTACCCTCCATCAAAGGTAGATATAGCACTAGAGTGTGCAAGGATGCAGCATAGGTTTCCAGTGCCTCCGTTGGAGGTGCAAGACTTCCCTCAAGTTGGCATGAATTTTGAACTGAAGATGTCACAAGCCTCAGGTTCCATGTGGGGAAGCCGAAATGAAACAGATATCTTGCAAGAAATTCTTTCAGTTGCTCATGCTTCCCAGGAACTAATAAATCACTCATCACAAGCAATATTGGGTGGCAATGAAAATTATGTTCCTCATGAAAATGATTTTACTTTTATGGTTGGCACCAATTACAATCATGTGAATGATATGAACTCCATGAGATATGTTGATCACAAAGCATGGGAAGACCCAAATATAAGATCAATAGAGATCGGGGATTTTGAAGATGAATTTAAGACAGATAAGATGGTGGATGATTTAAGATGGGTTGGAATGTCAAGCAAAAATATAGAAAAGGGCTTCATGGAAGAGCAAAAGATTGTTCCAATTCAGGACATCTCAAGCTTCCAAACTAACAGGGAAGAAAATGAGATGCAAGGATCAGCGCAACAAAATGGCAACAACGAACTCAATGGTACTGAAATTGAGGATTTCTCATTGGGGTTTATCAATGATAGTGACCCCACTGAAAACTTTATGGATGAAAGCAACATTGATTATTCAAATTCTACAAATTTTGAGGTTGTTGAGGAAACAAAAGTGAGTCATGGAATGTTTGTCTCTACTCGTCAAGTGGCTGATACATTCTTTCATCAAATAACTCCTTCACAAACCATCAAAGTTCAACTCAATCCAATGTTGGCTAACAATCAATCTATAGAGAATGAAGTAATGGTTAACCAAGGGTCCTCTTTCCATAGAAAATTTAAGACCTATGTCATGGGAAAGCTCATAAAGCCATCAAACTCAGCAGTAAGTGCCCTTGTATTCATCTTTGCACTTCTGTTGGTTCATTGTGTCCATTTGAAGGAGCAAGTGGAAGATTGGAGTAGTGCTAGCAGCATGAAGAGAATGGGACAACCAAATGAGACTACAATATTGAAAGAACAAGAAAAAATTTGGTTTGTTGGTATTAAAAGTGGGAAAGGATTTAGTGTGGTCTTGAAGAAGATAGGCATTTTCCTTACCATATCTTTGGCTCTTTGTACCATGTGGGCTAAACACATCATAGTTAACCCTTGA 1956 0.3942 MAPVSLPPGFRFHPTDEELVSYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQTRAIGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECETASGLQDAYALCRVFKKTVVIAPKVGEHYVNVTSHANQITSDQSSSIELYSDGRGEVLESSNYLMPWDTCSSQNINRTNANINGGTRDNETWTHFLSEDLLNLPTSSSFPNYGSMTYPPSKVDIALECARMQHRFPVPPLEVQDFPQVGMNFELKMSQASGSMWGSRNETDILQEILSVAHASQELINHSSQAILGGNENYVPHENDFTFMVGTNYNHVNDMNSMRYVDHKAWEDPNIRSIEIGDFEDEFKTDKMVDDLRWVGMSSKNIEKGFMEEQKIVPIQDISSFQTNREENEMQGSAQQNGNNELNGTEIEDFSLGFINDSDPTENFMDESNIDYSNSTNFEVVEETKVSHGMFVSTRQVADTFFHQITPSQTIKVQLNPMLANNQSIENEVMVNQGSSFHRKFKTYVMGKLIKPSNSAVSALVFIFALLLVHCVHLKEQVEDWSSASSMKRMGQPNETTILKEQEKIWFVGIKSGKGFSVVLKKIGIFLTISLALCTMWAKHIIVNP* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1967 651 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 353 - -
Apr10g1967 651 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Apr10g1967 651 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Apr10g1967 651 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Apr10g1967 651 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 353 - -
Apr10g1967 651 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1967 Apr-Chr10 32594044 32598269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1967 1 642 NAC Transcription Factor Family AT1G65910 45.161 1.49e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr10g1967 NAM 4.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1967 - - gmx:100818019 1036.17