Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1948 ATGCTTCAACTTAAGCTACTGGCCTTAACCATGATATGGGGGTGCATTAACCTTCATGGTGCAGTTGCAAACCCACAGACACATTTTGTAAACAAAGGATGCAGCCCATACAACGCATCCAACATGCATAGCTTCTTTGCCAATATCAATGACACGTTTTCAAGAATGAGAGCACAAATTAGCAATCAAAACAAGCACTTTGCCACAGCAGAGAAAGCAAGGGGAGAGATGCTGACATATTCCATGTTTCAATGCAGAAACTATCTCTCAAAAAATGATTGTCTTGCTTGCTTCACCACTGCCACCGCCCAAATCCGCAACTGTTCAGATGCCAACGGTGCCAGAATCATCTATGATGGCTGCTTCCTCAGGTACGAGAGTGAGAGGTTCTACGATCAAACCACTGAACCTGGCAATGGTGTATCATGTGTGAACACGAGTGCAAAGAGTGCTGGTTTTAGAGCAACTGGGCTACAAGTGCTAATGGATCTCCAAACAGCAACACCCTCCATTAAAGGGTTTTTTGCAGCTACTAAGACACCTGTGGTTGGTGTTGGTGCAATTTATGCCTTTGCGCAATGTGTTGAAACAATCACACCCAGTGGTTGTTTGGATTGCTTGAAAGTTGGATACAACAACTTATATAATTGTCTTCCCAACACAGATGGTAGAGCATATGATGCTGGGTGTTTTATGAGATACTCCACCACACCCTTCTTTCCTGATAACCAGACCATTGTCATAAAACCCTATTTAAAACAAGGAGGTTCTAGCAAGAAGTGGGCCATTATAGGTGGTGTTGTTGGAGGTGGAGGTCTTCTGGTGATCCTCCTTGCATTGTTTGCCTGGCGAAGATCCAGAAAACCTAAGAGAGTTCCTAGAGGTGATATATTGGGAGCAACGGAGTTAAAAGGTCCAGTCAACTATAAGTATGATGATTTGAAAGCTGCAACAAAAAATTTTAGTAATGAAAATAAACTAGGAGAAGGAGGATTTGGGGATGTATACAAGGGTACCTTGAAAAATGGAAAGATTGTAGCAGTCAAGAAATTAGTGTTGAGAAAATCCAACAAGATGGAGGATGATTTTGAAAGTGAAGTAAAGTTAATAAGTAATGTTCATCATCGAAATCTCGTTAGACTTCTTGGTTGTTGCAGTAAAGGTGAAGAGAGAATCTTGGTTTATGAATACATGGCAAATAGCAGCCTTGACAGATTCTTATTTGGTAACTCAAGTAACAAAGGTTCCCTCAATTGGACCCAACGGTATGACATAATTCTAGGCACAGCAAGGGGATTGGCTTATTTGCATGAGGAATTTCATGTTTCCATAATACATAGAGATATAAAAACTGGTAATATCCTCTTAGATGATGATCTTCAACCAAAAATTGCTGATTTTGGATTAGCAAGACTTTTGCCAGGGGATCGATCTCATCTCAGCACAAGATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATCCATGGTCAATTATCTGAGAAGGCTGATACCTACAGCTATGGTATTGTAGTCCTAGAAATCATAAGTGGCCAAAAGAGTACAAATGTCAGGGAAGATGAGGATGGTCGCGAATATCTTCTTAAACGCGCATGGAAGCTATATGAGAGAGGCATGCACTTGGAGCTAGTGGACAAGGGCATAGACCCTAATGACTATGATGGTGAAGAAGTGCAGAAAATCATAGAAATTGCTTTGCTATGCACTCAAGCATCAGCTGCATCAAGACCAACAATGTCTGAAGTAGTAGTTCTACTCAAAAGTAAGAGCTTATTTGAGCATCTTCAACCAACCATGCCTGTGTTTGTTGAATCGAATTTGAAGAACCGAGAAGGGAACTCAACCTCTTCAACTACTGGTTCTTCATCTAAAGCTACGGCTTCCATTTCTGTTCTATCAGCTCGATGA 1935 0.4124 MLQLKLLALTMIWGCINLHGAVANPQTHFVNKGCSPYNASNMHSFFANINDTFSRMRAQISNQNKHFATAEKARGEMLTYSMFQCRNYLSKNDCLACFTTATAQIRNCSDANGARIIYDGCFLRYESERFYDQTTEPGNGVSCVNTSAKSAGFRATGLQVLMDLQTATPSIKGFFAATKTPVVGVGAIYAFAQCVETITPSGCLDCLKVGYNNLYNCLPNTDGRAYDAGCFMRYSTTPFFPDNQTIVIKPYLKQGGSSKKWAIIGGVVGGGGLLVILLALFAWRRSRKPKRVPRGDILGATELKGPVNYKYDDLKAATKNFSNENKLGEGGFGDVYKGTLKNGKIVAVKKLVLRKSNKMEDDFESEVKLISNVHHRNLVRLLGCCSKGEERILVYEYMANSSLDRFLFGNSSNKGSLNWTQRYDIILGTARGLAYLHEEFHVSIIHRDIKTGNILLDDDLQPKIADFGLARLLPGDRSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTNVREDEDGREYLLKRAWKLYERGMHLELVDKGIDPNDYDGEEVQKIIEIALLCTQASAASRPTMSEVVVLLKSKSLFEHLQPTMPVFVESNLKNREGNSTSSTTGSSSKATASISVLSAR* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1948 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Apr10g1948 644 ProSitePatterns Protein kinases ATP-binding region signature. 327 350 IPR017441 GO:0005524
Apr10g1948 644 Gene3D - 26 130 IPR038408 -
Apr10g1948 644 Gene3D - 141 239 IPR038408 -
Apr10g1948 644 MobiDBLite consensus disorder prediction 613 644 - -
Apr10g1948 644 ProSiteProfiles Protein kinase domain profile. 321 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1948 644 Gene3D Transferase(Phosphotransferase) domain 1 398 608 - -
Apr10g1948 644 MobiDBLite consensus disorder prediction 616 644 - -
Apr10g1948 644 ProSiteProfiles Gnk2-homologous domain profile. 135 239 IPR002902 -
Apr10g1948 644 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 636 - -
Apr10g1948 644 Pfam Protein kinase domain 322 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1948 644 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Apr10g1948 644 SMART serkin_6 321 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1948 644 SUPERFAMILY Protein kinase-like (PK-like) 304 595 IPR011009 -
Apr10g1948 644 CDD STKc_IRAK 327 596 - -
Apr10g1948 644 Pfam Salt stress response/antifungal 148 236 IPR002902 -
Apr10g1948 644 Pfam Salt stress response/antifungal 37 127 IPR002902 -
Apr10g1948 644 Gene3D Phosphorylase Kinase; domain 1 295 397 - -
Apr10g1948 644 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 14 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1948 Apr-Chr10 32417830 32423572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1948 1 644 Receptor kinase-like Gene Family AT1G70520 37.309 1.86e-129 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr10g1948 Pkinase 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1948 - - vun:114187094 981.859