Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1946 ATGGGAAACGTAGCAGTTCCTGTTAAGTTTATGTCAAATAAGACTGAATTGGCATGGTGCAAGAAAAGCTCTTATAATCTTAAGAAGATGGAGGTGGAGTTGAAGTTGAAGCTCCTTGTCTTAGCCTTGTTGATGGTGGGGGCAATAGCAGACCCTCAAATTCGATTAATCAACAAGGGGTGTAGCCAATACAACGCTACCAATTTGCTCAATTTTTACCAAAATCTGAACGCAACTTTCGTTGATCTAAGAACACAAGTTAGTAACCAAAGCAAGAACTTTGCCACAGCCCAGGAAGCAAAAGGAGCAGATCCTGTCTATGCTTTATTTCAATGTAGAAAATACCTCTCTAACGCTGATTGCGCCGCCTGCTTCGACGTCGCCGCCGCCCAAATCCGCAACTGCTCCGCCGGAGCCAACGGTGCTCGTGTCATATACGACGGCTGCTTCCTTAGGTATGAGAGCAGTGGCTTCTTTGATCAAACCACTTTACCTGGCAACAGTATGATTTGTGGAAATCAGAGAGCAGTTGGAGCCACCAGTACCACTTTTAATGCAACAGCACGACAAGTGTTAATGGATTTGCAAATTGCAACACCCAAAATTAGTGGTTTTTTTGCAGCTACCAAGACACAAGTGGCTGGTGGTGGTGCAATCTATGCCATTGCACAATGTGCTGAAACTGTCACAGAGAGTGGTTGCTTGGATTGCTTGACAGTTGGGGTCACCAACATACAAAGTTGTTTGCCCAATACAGATGGTAGAGCATTTGATGCTGGCTGTTTTATGAGATACTCAGAGATATCCTTCTTTCCTGATAACCAGACCATTGATATCACACCCTTCTTGAAACAAGATGGTTCAAGCAAGAAAGGAGCTATTATTGGTGGTGTTGTTGGAGGTGTAGGTCTTGTTGTGATCCTCCTTGCACTATTTGCCTGGCTTAGATGGTACCAGAAACCCAAGAGGGCTCCAAGAGGTGACATACTGGGAGCAACTGAGTTAAAAGGTCCAGTTACCTACAGGTATAAAGATTTAAAGTCAGCAACAAAAAATTTCAGTGATGAAAACAAACTTGGAGAAGGAGGCTTTGGAGATGTATACAAGGGCACTCTGAAAAATGGTAAAGTAGTTGCAGTCAAGAAATTAATTTTAGGCCAATCCGGAAAGATGGATGAACAATTCGAAAGTGAAGTAAAGCTTATAAGTAATGTTCATCATAGGAATCTAGTTCGGCTTCTTGGATGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGCCAAACAGCAGCCTTGACAAATTCTTATTCGGTGAAAAGAATGGTTCTCTTAATTGGAAACAAAGATATGATATAATTTTAGGCACAGCAAGGGGTTTGGCCTATCTTCACGAGGATTTCCATGTTTGCATCATACATAGAGATATAAAGCCTAGCAATATCCTCTTAGATGATGACCTTCAGCCTAGAATTGCTGATTTTGGGTTGGCAAGACTTCTACCAGAGGATCAATCTCATCTTAGCACCAGATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATCCATGGTCAATTATCAGAGAAGGCTGACACCTACAGCTTTGGTGTTGTGGTCCTAGAAATCATAAGTGGCCAAAAGAGCAGTGAATTGAGGGATGATGCTGAAGGTGAATTTCTCCTTCAAAGGGCATGGAAACTTTATGAGGGTGATATGCATTTGGAGTTGGTTGACAAGACATTGAATCCTGATGACTATGATGCAGAAGAAGTGAAAAAAATAATAGAGATTGCATTGCTATGCACTCAAGCATCAGCTGCTGCGAGGCCAACAATGTCTGAAATAGCAATCTTACTCAAAAGCAAAAATTTACTGGGTCATATGAGGCCTGCTATGCCTGTTTTTGTTGAATCTAACTTTAGGTCTCGGGTAGACATTTCTATCTCAACTGCTGGTTCCTCTACTACATCTAATGCCACTGTTTCCACTTCTGTACTATCAGCAAGATGA 2025 0.4202 MGNVAVPVKFMSNKTELAWCKKSSYNLKKMEVELKLKLLVLALLMVGAIADPQIRLINKGCSQYNATNLLNFYQNLNATFVDLRTQVSNQSKNFATAQEAKGADPVYALFQCRKYLSNADCAACFDVAAAQIRNCSAGANGARVIYDGCFLRYESSGFFDQTTLPGNSMICGNQRAVGATSTTFNATARQVLMDLQIATPKISGFFAATKTQVAGGGAIYAIAQCAETVTESGCLDCLTVGVTNIQSCLPNTDGRAFDAGCFMRYSEISFFPDNQTIDITPFLKQDGSSKKGAIIGGVVGGVGLVVILLALFAWLRWYQKPKRAPRGDILGATELKGPVTYRYKDLKSATKNFSDENKLGEGGFGDVYKGTLKNGKVVAVKKLILGQSGKMDEQFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMPNSSLDKFLFGEKNGSLNWKQRYDIILGTARGLAYLHEDFHVCIIHRDIKPSNILLDDDLQPRIADFGLARLLPEDQSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSFGVVVLEIISGQKSSELRDDAEGEFLLQRAWKLYEGDMHLELVDKTLNPDDYDAEEVKKIIEIALLCTQASAAARPTMSEIAILLKSKNLLGHMRPAMPVFVESNFRSRVDISISTAGSSTTSNATVSTSVLSAR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1946 674 ProSiteProfiles Protein kinase domain profile. 353 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1946 674 ProSiteProfiles Gnk2-homologous domain profile. 54 158 IPR002902 -
Apr10g1946 674 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 42 668 - -
Apr10g1946 674 Gene3D Phosphorylase Kinase; domain 1 328 429 - -
Apr10g1946 674 Pfam Salt stress response/antifungal 179 266 IPR002902 -
Apr10g1946 674 Pfam Salt stress response/antifungal 64 155 IPR002902 -
Apr10g1946 674 SMART serkin_6 353 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1946 674 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Apr10g1946 674 SUPERFAMILY Protein kinase-like (PK-like) 337 636 IPR011009 -
Apr10g1946 674 CDD STKc_IRAK 359 625 - -
Apr10g1946 674 ProSiteProfiles Gnk2-homologous domain profile. 165 270 IPR002902 -
Apr10g1946 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Apr10g1946 674 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 668 - -
Apr10g1946 674 Pfam Protein kinase domain 354 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1946 674 Gene3D Transferase(Phosphotransferase) domain 1 430 632 - -
Apr10g1946 674 Gene3D - 167 270 IPR038408 -
Apr10g1946 674 Gene3D - 53 158 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1946 Apr-Chr10 32401507 32410151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1946 27 674 Receptor kinase-like Gene Family AT1G70520 36.336 6.04e-124 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr10g1946 Pkinase 3.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1946 - - gmx:100813585 1039.25