Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1941 ATGGTTAGGTGGGTGAGGACTAAGGTTCTGGGGAGTGGTACCTATGGCACTGTGTATCAAGCTATTTGTGAGGGTTATCACAAGCCCATAGCTCTCAAAACTACAGCACTAAGCTCGTCAGAAACGTTGGAGAAGGAGAACAAAATTTTGGACGCTTTATTTGGTTGCCCAGAAATCATTAATTCACATGGCACAGAGATCACGTGCGAGGATGGAATCATAGTCTCCAATCTCATGATGGAGTACGCCCCTTATGGCACTCTCGGTGACCTTATCAAGAAAGGGCCACTCATGGAAACAAGGACTACCAAAGTGTACATACAAATGCTTTTGAGAGGGCTTTCATTCATGCATCAAAGGGGTTACGTTCATTGTGATCTCAAACCCGATAACATCCTCATGTTTCCACCTTATAAGTATCATGATCAAAGGTTTAATCAACTGAAGATTGCGGACTTTGGATTGTGTAAAACTCCTGAAGAGAGTTTGAATGAGGAGGACTGGAAGTTCTCTTTTAGGGGGACTCCTTCTTACATGTCACCTGAATCCATCGCATGTGGCCAAATTGGACCAGCATTGGATATATGGTCTTTTGGGTGTGTAGTTTTAGAGATGTTCACTGGCTACTCCTGGTGGGTTATGGAACATTGCTCTCTAGAGGACATAATGGTTAGGGTTGGGATCAATAACGAAGCACCAAGCATTCCTAGTGGACTCTCCTCTCTATGCAAAGACTTCTTACAGAAGTGCTTTATCGCCAACCCTAATGAAAGGTGGACTGCCGACATGCTTCTCCATAATCATCCTTTCACTCATATCTGTTAG 825 0.4376 MVRWVRTKVLGSGTYGTVYQAICEGYHKPIALKTTALSSSETLEKENKILDALFGCPEIINSHGTEITCEDGIIVSNLMMEYAPYGTLGDLIKKGPLMETRTTKVYIQMLLRGLSFMHQRGYVHCDLKPDNILMFPPYKYHDQRFNQLKIADFGLCKTPEESLNEEDWKFSFRGTPSYMSPESIACGQIGPALDIWSFGCVVLEMFTGYSWWVMEHCSLEDIMVRVGINNEAPSIPSGLSSLCKDFLQKCFIANPNERWTADMLLHNHPFTHIC* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1941 274 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Apr10g1941 274 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 271 - -
Apr10g1941 274 SMART serkin_6 4 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1941 274 SUPERFAMILY Protein kinase-like (PK-like) 3 271 IPR011009 -
Apr10g1941 274 ProSiteProfiles Protein kinase domain profile. 4 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1941 274 Gene3D Transferase(Phosphotransferase) domain 1 2 273 - -
Apr10g1941 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Apr10g1941 274 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 271 - -
Apr10g1941 274 Pfam Protein kinase domain 6 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1941 Apr-Chr10 32376343 32377167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1941 2 273 MAP Kinase Kinase Kinase AT3G50310 39.068 2.63e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Apr10g1941 Pkinase 9.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1941 - - gmx:102667952 261.536