Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1936 ATGTCCAACCGAATTTGCATCAAAAAGGGGTTGTTGACACTAACGGGTACCCACACTGTGACCAAACTCGAGCACCCACTTTGTGTTTCCACGTGTGTTCGATCAAAAACAACGTCTTCTCAGTATGTAGCATCAAGATTTCGCGACCCTACATTTGAGAAACTCATGGACAATTACAAGAACCTTGTCAAAGTCATTTCCATTCAAGACCTCATTCTTGCAAACCCAAACAACCCATCAGTCTCCATTGAATTCCTCTCCAAGCTCTCCCAGAAGCTTCACCTTAACCGCGGTGCCACTGCCTTCCTCCGCAAGTTTCCTCGCATCTTCCACATTTACTATGAGCCTTCCAAGTTGAAGCCTTTTTGCAGGTTAACTGATGCTGCTCTTGATGTTTCGCGTCAGGAATCGGAGGCCATTAATGCTTCTTTGCCTGTTGTTGTTGAAAGGCTTGTTAGGATATTGTCAATGTCTGCATCCAAAATGGTGCCTCTTAGAGCAATTTTTAAGGTTTGGAAGGAACTTGGCCTGCCTGATGATTTTGAGGACTCAGTTATATCTGCAAATTCTAGTGTTTTTCAGCTGTGTGATGCGCATGAACCGAATACTCATTTGTTGAAGCTGGTTGATGGTGTTCCAAGCAATGGTTTTAGGGCGATTGTTGAGGATTGGAGGGTTGTTGAGTGCTGCAAGGAGGATTGCAGTGTTGATAGGATGGAAATGCGGTTCAGTTTCAAACATGGGCATCCTCCGGGGATGAGGCTGACCAAGAATTTCAGGGCCAAGGTGAAGGAATGGCAGAGGTTGCCATATGTGGGGCCGTATGAGGTGGTGGGTGAGGGGAAAAAGTCTAAGGCTGGAATGATGGCTATGGAGAAGCGAGCGGTGTCTATTGTTCATGAGTTCCTAAGTTTGACAGTGGAGAAGATGGTGGAGGTTGAGAAGATCAGCCAATTTAGAAAATGGTTTGGAATTGATTTGAATATAAGGGATCTGTTCTTGGATCACCCAGGGATCTTCTATTTGTCAACTAAGGGTAAAAAGCATACCGTTTTCTTGAGGGAAGCTTACGAACGGGGGTGTTTAATCGAACCAAATCCTGTCTATGAGGCAAGGAGGAGGCTACTTGATCTTGTTGTCTTAGGGCGTAGGGGTCTGCCTGCTGTTAATTCGAAGTTGCTGGATAGAAGCAGTTGCAATGAGGTTGGGCAAGAGGACAACCAGCAAAAACATGGCTTGTTACCATCTTGA 1251 0.454 MSNRICIKKGLLTLTGTHTVTKLEHPLCVSTCVRSKTTSSQYVASRFRDPTFEKLMDNYKNLVKVISIQDLILANPNNPSVSIEFLSKLSQKLHLNRGATAFLRKFPRIFHIYYEPSKLKPFCRLTDAALDVSRQESEAINASLPVVVERLVRILSMSASKMVPLRAIFKVWKELGLPDDFEDSVISANSSVFQLCDAHEPNTHLLKLVDGVPSNGFRAIVEDWRVVECCKEDCSVDRMEMRFSFKHGHPPGMRLTKNFRAKVKEWQRLPYVGPYEVVGEGKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNIRDLFLDHPGIFYLSTKGKKHTVFLREAYERGCLIEPNPVYEARRRLLDLVVLGRRGLPAVNSKLLDRSSCNEVGQEDNQQKHGLLPS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1936 416 PANTHER OS04G0618900 PROTEIN 23 410 - -
Apr10g1936 416 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 23 410 IPR045040 GO:0003723
Apr10g1936 416 Pfam Plant organelle RNA recognition domain 48 383 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1936 Apr-Chr10 32347820 32350296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1936 - - gmx:100808404 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1936 10 32347820 32350296 Apr8g1366 8 20894859 20898423 PCT