Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1914 ATGTATCTTTCAAAGGGTTGCAAGCATGAAGTTGTTTTCATCTTATGGTTCTGTTGCTATTTGCCACTTGCTGCTGCACAGAATAATATCACTGACCCCACTGAAGTTGAAGCTTTGAATGCCATTAAGAATAGTTTGATTGATGCTAATGGAAATTTGAGCAATTGGAATCGTGGAGACCCATGTACGTCTAGGTGGAAAGGGGTTTTGTGCTTCAATGTAACACAAGACGATGGCTATCTACATGTTGAAGAATTGCAACTACTGAGAATGAACTTGTCCGGAACTTTGGCACCAGATGTTGGCAAATTAACTTATCTGAAAAGATTGAACATTATGTGGAACAACATAAGTGGGAGTATCCCAAAGGAAATTGGCAATATCAAATCTTTGGTGCTTTTGCTCCTGAATGGAAATAATTTAACGGGTTCACTACCAGATGAGCTTGGCTATCTTCCAAACCTGGATAGAATACAAATAGATCAGAACCACATCTCAGGACCTATACCTACATCATTTGCAAACCTGAATGTGACTAAGCACTTTCACATGAACAATAATTCACTTAGCGGGCAAATCCCACCAGAGCTTTCCCGATTACCAAAGCTTGTTCACCTTCTTCTTGACAACAACAATTTATCAGGATATCTTCCCCCTGAGCTGTCCAAAATGCCAAGCTTACTTATCATTCAACTTGATAACAATAACTTCAGTGGAAATAGCATTCCAGATAGCTATGCCAACATGTCAAAGTTGTTGAAAATGAGCCTTAGGAATTGCAGCTTGCAAGGACCAATTCCTGATTTAAGCACGATACCAAAACTTCTTTATCTTGACCTCAGTTTCAACCAGTTGAATGAATCGATTCCTCCCAATAAGCTTTCTGGCAATATCACAACCATTGATTTATCAAATAACAAACTTACTGGAAATATTCCATCCTACTTTTCTGATCTTCCAAATCTTCAGATGTTGTCACTTGCAAACAACTCGTTGAATGGCAGTATTTCTTCCTCCATTTGGCAGAATAAGACTTTAAACGGAAGAGAAAATTTTGTCTTGAAGTTGGAAAATAATAGTATTACAACCATATTAGGCAGTATTGATCTTCCTCCAAATGTCACAGTTGGGCTTGGTGGGAATCCCATTTGCCCAAATACAACCCTGGTTCAGTTCTGTGGATCTGAAGGTGCTAGTGTAATAAATGGCTCATTTTCAACAAACTCCAGTTCCTGTCAAGTTCAATCATGCCCTCCTCCTTATGAATACTCTGTGAATTGTTTCTGTGGGCTCCCATTGCTTGTTGGTTATCGGCTGAAAAGTCCTGGATTTTCAGACTTTCGTCCGTATTTGAACGATTTTGATCACTACCTGACTAATGGTCTTGCAATATCTACCGATCAGCTAGAATATGATTTTTATTGGCAAGCAGGACCTCGACTGAGAATGGACTTGAAGCTTTTTCCTGCATATGTTGATCAGAATAGTAATCATACTTTCAATAGTAGTGAGCTCCTACGGCTCACAGGCATGTTCACAGGATGGTTAATTGCTGACAGTGATTTGTATGGGCCTTATGAACTGATTGGATTTAATCTTTTGGGTCCTTATGCAGATGTGATTGGTTCCTCTTCAAAATCACGGATAAGTACTGGTGCACTGGTTGGCATAATCATAGGCTCAATAGCTTGTGCTGTGGCATTATCTGCAATTGCTACTATTCTTATAGTAAGAATAAGATTGAGAGATTATCGTGCAATTTCCAAACGACGTCATGCATCTAAGATCTCAATAAAAATTGATGGTGTAAGAGCCTTTACTTATGGAGAATTGTCCACCGCTACAAACAATTTCAGCAGCTCTTCTCAAGTTGGACAAGGGGGCTATGGAAAGGTTTACAAAGGTATTCTTTCTGATGGCACAGTTGTTGCCATTAAACGTGCACAAGAGGGATCCCTACAAGGTGAGAAGGAGTTTCTTACAGAGATATCATTATTATCAAGGCTACATCATCGCAATCTTGTGTCTCTGCTTGGATACTGTGATGAGGAAGGTGAACAGATGCTGGTTTATGAATTTATGTCAAATGGCACACTAAGGGATCACCTTTCTGTTACAGCAAAAGCACCTCTAAGTTTTGCCATGAGATTGAAGATGGCACTAGGGGCAGCTAAAGGTCTTATGTATCTACACACAGAAGCGGATCCTCCAATATTTCACCGAGATGTCAAGGCCAGCAACATATTATTGGATTCTAAGTTCTCTGCAAAAGTGGCTGATTTTGGACTTTCACGGCTTGCTCCAGTTCCTGATATTGAAGGAATTGTGCCTGGTCATGTGTCTACAGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACTGATAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTTTGACTGGGATGCAACCTATCTCACACGGCAAAAATATTGTTAGAGAGGTTAATGTTGCATACCAATCTGGTGTGATATTTTCAATTATTGATGGACGTATGGGGTCCTATCCATCTGAGCATGTGGAGAAATTTTTGGCTTTGGCCTTGAAATGTTGTGAAGATGAGCCGGATGCACGGCCAAAAATGGCAGAAGTGGTTAGAGAACTTGAAACCATATGGTCTACTATGCCGGAATCTGATACCAAGAGGGCTGAATCTTTGACAAGTGATTCTGGTTCTGGCAAAATAGACATTCACAGTACACCATCTTCATCATCTGCTATGAAGACTCCTTTTGTATCAGGAGATGTGTCAGGTAGTGATCTTGTTAGTGGTGTAATACCAAGCATCAAGCCAAGATAG 2856 0.4016 MYLSKGCKHEVVFILWFCCYLPLAAAQNNITDPTEVEALNAIKNSLIDANGNLSNWNRGDPCTSRWKGVLCFNVTQDDGYLHVEELQLLRMNLSGTLAPDVGKLTYLKRLNIMWNNISGSIPKEIGNIKSLVLLLLNGNNLTGSLPDELGYLPNLDRIQIDQNHISGPIPTSFANLNVTKHFHMNNNSLSGQIPPELSRLPKLVHLLLDNNNLSGYLPPELSKMPSLLIIQLDNNNFSGNSIPDSYANMSKLLKMSLRNCSLQGPIPDLSTIPKLLYLDLSFNQLNESIPPNKLSGNITTIDLSNNKLTGNIPSYFSDLPNLQMLSLANNSLNGSISSSIWQNKTLNGRENFVLKLENNSITTILGSIDLPPNVTVGLGGNPICPNTTLVQFCGSEGASVINGSFSTNSSSCQVQSCPPPYEYSVNCFCGLPLLVGYRLKSPGFSDFRPYLNDFDHYLTNGLAISTDQLEYDFYWQAGPRLRMDLKLFPAYVDQNSNHTFNSSELLRLTGMFTGWLIADSDLYGPYELIGFNLLGPYADVIGSSSKSRISTGALVGIIIGSIACAVALSAIATILIVRIRLRDYRAISKRRHASKISIKIDGVRAFTYGELSTATNNFSSSSQVGQGGYGKVYKGILSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLLGYCDEEGEQMLVYEFMSNGTLRDHLSVTAKAPLSFAMRLKMALGAAKGLMYLHTEADPPIFHRDVKASNILLDSKFSAKVADFGLSRLAPVPDIEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNVAYQSGVIFSIIDGRMGSYPSEHVEKFLALALKCCEDEPDARPKMAEVVRELETIWSTMPESDTKRAESLTSDSGSGKIDIHSTPSSSSAMKTPFVSGDVSGSDLVSGVIPSIKPR* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1914 951 ProSiteProfiles Protein kinase domain profile. 618 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1914 951 Pfam Protein kinase domain 619 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1914 951 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Apr10g1914 951 Pfam Leucine rich repeat 297 335 IPR001611 GO:0005515
Apr10g1914 951 Gene3D Transferase(Phosphotransferase) domain 1 694 911 - -
Apr10g1914 951 MobiDBLite consensus disorder prediction 895 930 - -
Apr10g1914 951 SMART LRR_typ_2 200 224 IPR003591 -
Apr10g1914 951 SMART LRR_typ_2 319 343 IPR003591 -
Apr10g1914 951 SMART LRR_typ_2 128 152 IPR003591 -
Apr10g1914 951 SMART LRR_typ_2 272 296 IPR003591 -
Apr10g1914 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Apr10g1914 951 CDD STKc_IRAK 624 890 - -
Apr10g1914 951 SUPERFAMILY Protein kinase-like (PK-like) 603 899 IPR011009 -
Apr10g1914 951 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Apr10g1914 951 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 918 - -
Apr10g1914 951 SMART serkin_6 618 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1914 951 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Apr10g1914 951 SUPERFAMILY L domain-like 41 392 - -
Apr10g1914 951 Gene3D Ribonuclease Inhibitor 297 376 IPR032675 -
Apr10g1914 951 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 918 - -
Apr10g1914 951 Gene3D Phosphorylase Kinase; domain 1 582 693 - -
Apr10g1914 951 Gene3D Ribonuclease Inhibitor 31 296 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1914 Apr-Chr10 32157134 32168112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1914 18 900 Receptor kinase-like Gene Family AT5G01950 59.665 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Apr10g1914 Pkinase 9.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1914 - - gmx:100786467 1605.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1914 10 32157134 32168112 Apr9g1233 9 21973176 21984179 PCT