Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1907 ATGGCAGACGAAGCACACAATGATGTGAAGGAGGAGGTAGCTGAAATTGCTCCATTTGATCCTACAAAGAAGAAAAAGAAAAAGAAGATCACAATTGTAGATCCTGCTGATGATTCGGTGGACAAGTTGGCTGAGAAGACAGAAAATCTGACAGTATCTGAGGGGGTTGAGAGTACATTTACTGGTTTAAAGAAGAAGAAAAAGAAGCATGTTGAAATCAGTAACTTAAATGATGAGAGTGGAGATGCAAATGAAGATTTGGATGATCACGCTGAAGAAGATGAAGAAGATGTTGCTTCCTTGCAGCCCCGTTATCCTTGGGAAGGGAGTGACCGTGATTATAAATATGAAGAGCTTCTTGGCAGGGTGTTTAACATTCTTCGTGAGAATAATCCAGAACTTGCTGGAGACCGCCGGAGGACTGTTATGAGGCCTCCACAAGTACTACGTGAGGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGATCTGTGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAACTGGGTACGAGTGGCTCTCTAGATGGACAGCAGAGGTTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATGTCAATGAATATGTTATTTGCCTTGGATGTAAAAGTCCTGACACTATACTTACTAAGGAAAATCGTTTGTTCTTTCTCCGGTGTGAAAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAGGCAGGCTTTGTTGCTCGTGTTGGCCGTAGGAACGCTGGGACATGA 807 0.4325 MADEAHNDVKEEVAEIAPFDPTKKKKKKKITIVDPADDSVDKLAEKTENLTVSEGVESTFTGLKKKKKKHVEISNLNDESGDANEDLDDHAEEDEEDVASLQPRYPWEGSDRDYKYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1907 268 Coils Coil 73 93 - -
Apr10g1907 268 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
Apr10g1907 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 268 IPR045196 GO:0003743|GO:0006413
Apr10g1907 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 268 - -
Apr10g1907 268 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 252 IPR016190 GO:0003743|GO:0006413
Apr10g1907 268 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 113 220 IPR016189 GO:0003743|GO:0006413
Apr10g1907 268 Gene3D - 111 253 - -
Apr10g1907 268 MobiDBLite consensus disorder prediction 79 96 - -
Apr10g1907 268 MobiDBLite consensus disorder prediction 61 104 - -
Apr10g1907 268 Pfam Domain found in IF2B/IF5 137 246 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1907 Apr-Chr10 32095041 32099136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1907 1 264 Eukaryotic Initiation Factors Gene Family AT5G20920 76.404 1.97e-139 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1907 K03238 - gmx:100783618 467.233