Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1900 ATGGCTTTGCCTTTGTTGTCACAACTTCAAGGCTTTTGGCCTTCTTTCCTTGCTGTAATCGCTGGCATTATTATGATCATCAAAGCCCTAAGATCTGACGCGATTCAGAAATATTCCAACAAACAAAAGCCGAAACTCCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAACCTTCCTGAAATGCTTACAAACAAACCTGTCCAAAAGTGGATAAACAAACTCATGAAAGAAATGAACACTGAAATTGCATGTTTCCGCTTAGGAAATGCCTATGTTATCCCAGTGACATGTCCTACCATAGCCACTGAGTTCTTGAGAAAACAAGATGAAACTTTTGCATCAAGATCACTAAGCATGTGCACTGAACTCATTAGTGATGGATATTCTACCACACTTTTTGGGCCCTTTGGGAACCAATGGAAGAAAATGAAGAAAATCATAACCCATGATTTGCTTTCCCCACAAAAGCACCAATGGCTTCATGACAGAAGGGCTGCAGAAGCTGACAACATAATGTTTTACGTCTACAACAAATGCAAAAATGTGAACCATGATGGTGGTGTTGATGGTGGCCTTGTGAATATTAGGAGTGCTGCAAGGCATTACTGTGGTAACTTGATCAGGAAAGTTATTTTTAACACAAGGTATTTTGGGGAAGGTAGAAATGATGGAGGGCCTGGTCTTGAGGAAGTTGAACATGTTGATTCCGTCTTTGATTTGATTAAGTATGTTTATGCCTTTTCTCTTTCTGATTATATCCCATGCTTGAGGGGACTTGACTTGGATGGCCAGGAAAGGAAGGTGAAAGAAGTTTTGAGGATCGTGAATAAGCATCATGATCCCATCATTCAAAAGAGAATGAAACAATGGAATAATGGATTAAAGGTTAATGAAGAGGACTGGCTTGACATTCTACTCTCCCTGAAAGATGCAAACCACAACCCATCATTGACACTGAAGGAAATTAAAGCGCAAATTATAGAACTAATGCTTGCAACAATGGACAATCCATCAAATGCTTTTGAATGGGCACTAGCTGAAATGATAAACCAACCAGAGTTACTCCAACGAGCGACGGAAGAATTGGACAGTGTGGTAGGGAAAGAAAGGCTTGTTCAAGAATCAGACATTCCAAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGGCTTCATCCCATTGCACCTTTCATTCCACCCCATGTCTCTATGAGTGACACAACTGTGGGAAACTACTTCATCCCTAAGGGTAGCCATGTAATCATAGGAAGACGAGAACTGGGGAGAAACCCAAAAGTGTGGAATGAGCCCCTCAAGTTCAAACCTGAACGACACCTCAAGAGTGATGGATCCGATGTCGTTTTGACAGAGCCAGATTTGAGGTTCATGACATTCAGTATTGGAAGACGTGGTTGTCCTGGAGTGATGCTTGGCACTACTATGACTGTGATGCTATTTGCTAGGTTGCTTCATGGCTTCACTTGGAGTGCACCACCCAATGTTTCAACAATTAACCTTGCTGAGTCCGATGATGAAATTTTTCTCGCTGAGCCACTTGTCGCAATGGCAAAACCAAGATTAGCAGCAGAACTATACCACCGTCAAATTCAGTAA 1623 0.4196 MALPLLSQLQGFWPSFLAVIAGIIMIIKALRSDAIQKYSNKQKPKLPPGPKPWPIVGNLPEMLTNKPVQKWINKLMKEMNTEIACFRLGNAYVIPVTCPTIATEFLRKQDETFASRSLSMCTELISDGYSTTLFGPFGNQWKKMKKIITHDLLSPQKHQWLHDRRAAEADNIMFYVYNKCKNVNHDGGVDGGLVNIRSAARHYCGNLIRKVIFNTRYFGEGRNDGGPGLEEVEHVDSVFDLIKYVYAFSLSDYIPCLRGLDLDGQERKVKEVLRIVNKHHDPIIQKRMKQWNNGLKVNEEDWLDILLSLKDANHNPSLTLKEIKAQIIELMLATMDNPSNAFEWALAEMINQPELLQRATEELDSVVGKERLVQESDIPKLNYVKACAREAFRLHPIAPFIPPHVSMSDTTVGNYFIPKGSHVIIGRRELGRNPKVWNEPLKFKPERHLKSDGSDVVLTEPDLRFMTFSIGRRGCPGVMLGTTMTVMLFARLLHGFTWSAPPNVSTINLAESDDEIFLAEPLVAMAKPRLAAELYHRQIQ* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1900 540 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 535 - -
Apr10g1900 540 Pfam Cytochrome P450 47 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1900 540 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 15 535 - -
Apr10g1900 540 SUPERFAMILY Cytochrome P450 47 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1900 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Apr10g1900 540 Gene3D Cytochrome P450 38 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1900 540 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1900 540 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1900 540 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1900 540 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1900 540 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1900 540 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1900 540 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1900 540 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1900 Apr-Chr10 32032201 32034077 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1900 2 535 Cytochrome P450 AT4G39950 52.336 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1900 - K14984 gmx:100809902 884.789