Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1899 ATGGAACATGTTCTTTGCTCTCAATTCTCTCACCATCTACAATCCTCAGGATTCTGGTATCTCATTCTCGTGCTAATTTGCTTTACCTTTACGTTCTTCCTCAAAGTTAAGCATCGCTACTCTCATGAATCCAATAGAAAGAAATTGATCCCTCCTGGTCCCACACCTTGGCCTATAGTTGGTAATCTTCCTGAAATGCTCACAAACCAACCAACACTCAGATGGATACAAAAGATCATGAATGATCTAAACACTGAAATTGCATGCATCCGTCTAGGTAACATACATGTCATCACAGTGACTAGCCCTGAAATTGCGCGGGAATTTTTGATAAAAAATGATGCTGCTTTTGCATCAAGACCCTCTAACTGGTCAAGTGAACACGTGTCAGGTGGATATTTAACTGCTGCTCTTGTGCCCTATGGAGATCAGTGGAAGAAAATGAAGAGAGTCATAAAAAACGAGTTGTTTTCACCTTTTAGGTTCAATTGGCTTCATGACAAAAGGGTGGAAGAAGCTGATAATCTTGTGCGTTTTGTGTACAACCAATGCAAAAGTGGTGGTGCCCTTGTGAATGTGAAGGTTGCTGCCCAGAATTATGCAGGGAATGTAATTAGGAGGGTGATTTTCAATAGAAGGTACTTTGGAGAGGGTAGGGAAGATGGAGGACCAGGGTTTGAGGAAGTGGAACATGTAAAAGCACTTTTAACCGTGTTGAAGTATCTATTTGCATTTTGTATTTCTGATTACATGCCATGCTTGAGGGGACTTGACTTGGATGGTCATGAGAAAATCATGAAGGATGCTACTAAGGTTGTAAGGAAATATCATGATCCCATCATTGAGGACAGGATTCAGCAATGGAAAAATGGGGAAAGGACGCTTCAAGAAGACTTGCTTGATGTTCTCATCTGCCTCAAAGATGGTCATAACAAGCCACTGTTGAGTGTAGACGAAATCAAATCTCAAATTATTGAAATGTCGATTGCATCGGTGGATAATCCATCGAACGCACTCGAATGGGGACTTTCAGAAATGATAAATCAGCCAGAGTTACTTCAAAAGGCAACTGAAGAATTAGACCAAGTGGTTGGGAACAAAAGGCAAGTGCAAGAGTCAGATTTTCCGAAACTCAACTACATCAAGGCATGTGCAACTGAAGCATTTCGTCTTCACCCCGTAGATGATTTTAACGTTCCACATGTCGCAATGGCTGACACATTCATTTCCAATTACTTAATCCCAAAGGGTAGCCATGTGCTATTAAGGAGACAAGGACTTGGCCAAAACCCAAGAATTTGGAAAGAACCACTCAAGTTTAAACCTGAACGTCACCTAAAGAGTGATGGGTCTAATTTGGTTTTTACAGAACCAAGGTTGGATTTGATAATATTTAGCACCGGAAGACGTAGTTGTCCAGGCCTTGCGCTTGGAACTTCAGTGACTCTTACGCTATTTGCTAGGTTGTTGCATGGCTTTTCTTGGACTTTACCACCCAATCAATCTTCCATTGACCTCTCTGAGTGTGAAGTTGATACCGGCAAAGCTAAGCCACTTGTGGCATTTGCTAAACCAAGGTTGGCACCAGAGGCTTATGGTGTTTATTAA 1608 0.416 MEHVLCSQFSHHLQSSGFWYLILVLICFTFTFFLKVKHRYSHESNRKKLIPPGPTPWPIVGNLPEMLTNQPTLRWIQKIMNDLNTEIACIRLGNIHVITVTSPEIAREFLIKNDAAFASRPSNWSSEHVSGGYLTAALVPYGDQWKKMKRVIKNELFSPFRFNWLHDKRVEEADNLVRFVYNQCKSGGALVNVKVAAQNYAGNVIRRVIFNRRYFGEGREDGGPGFEEVEHVKALLTVLKYLFAFCISDYMPCLRGLDLDGHEKIMKDATKVVRKYHDPIIEDRIQQWKNGERTLQEDLLDVLICLKDGHNKPLLSVDEIKSQIIEMSIASVDNPSNALEWGLSEMINQPELLQKATEELDQVVGNKRQVQESDFPKLNYIKACATEAFRLHPVDDFNVPHVAMADTFISNYLIPKGSHVLLRRQGLGQNPRIWKEPLKFKPERHLKSDGSNLVFTEPRLDLIIFSTGRRSCPGLALGTSVTLTLFARLLHGFSWTLPPNQSSIDLSECEVDTGKAKPLVAFAKPRLAPEAYGVY* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1899 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Apr10g1899 535 Pfam Cytochrome P450 51 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1899 535 Coils Coil 353 373 - -
Apr10g1899 535 Gene3D Cytochrome P450 35 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1899 535 SUPERFAMILY Cytochrome P450 51 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1899 535 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 17 530 - -
Apr10g1899 535 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1899 535 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1899 535 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1899 535 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1899 535 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1899 535 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1899 535 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1899 535 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 17 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1899 Apr-Chr10 32017496 32019500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1899 14 532 Cytochrome P450 AT4G39950 50.860 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1899 - K12153 adu:107486438 684.1