Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1897 ATGGGTTCTTTCCTTGGTCTTTTATGGTCACATTTTCAACCCTTTTGGTTTTATTTGCTTGTTATGATTTCTTGCTTTATGATTGTCAAAGCCTTGAGATATCGCTTATTTGAGAAGCCAAAACTGCCCCCAGGTCCAGAATCATGGCCAATTGTTGGTACCATTCCTGAAATGCTAGCAAACAAGCCTGTATTTCGGTGGATTCACAATCTTATGAGAGAAATGAACACCGAAATTGCATGTATTCGCCTAGGGAATGTCCACGTAATCCCAGTGACATGCCCCACAATTGCCTGTGAATTTTTTAGGAAACATGATGCTAATTTTGCATCAAGACCACTAACCATGGCCACGGATATAATCTCTAGTGGTTATAAGACCATAGCCATTGTACCCTTTGGGGAACAATGGATGAAAATGAGGAGAATCTTCATCAACGATTTGTTCTCTCCGGTTAGGCACCAATGGTTTCATGACAAACGGAATGAAGAAGCGGATAACATTATCTTCTATCTCTACAACAAATGCAAAAATGTGAATTATGGTGGTCTAGTGAATGTGAGAAATGTTGCACAACATTATTGTTGTAATGTGATGAGGAAATTGATTTTTAATACAAGGTATTTTGGAAATGGTGGAGAAGATGGAGGGCATGGTTTTGAGGAAGAGGAACAAGTGGACGTGATTTTCATGTTGCTTAAGCACGTTTATGCCTTCTCTATTTCTGATTATGTCCCGTTCTTGAGGATGTTTGATTTGGATGGGCACAAGAGAATAGTAAAGAATGGTATGAGGATCATGAAGAAGTATCATCACCCAATCATTGAAAAGAGAATGAAGCAATGGAATGATGGATCGAATACCGTTGAAGAGGACTTGCTGGATGTTCTTATCTCACTCAAAGATGTCAATAATAATCCATTATTGACATTGAAGGAAATCGAGGCTTTGACAATAGAACTAATGCTAGGAGGAGCAGACAATCCATCAAATGCTATTGAATGTGCACTTGCGGAAATGATTAACCAGCCAGAACTGCTTCAACATGCAACTGAAGAATTGGATAAAGTTGTAGGTAAGAAAAGGATGGTTGAGGAATCAGATATTCCAAAGCTCAATTATGTGAAGGCTTGTTTAAGAGAAGCATTTCGCCTTCATCCCATTATACCTTTCAATCCTCCCCATGTTTCAACACATGACACAGTGGTAGCCAATTACTTCATCCCTAAGGGTAGCCATGTACTATTGAGTAGACATGGACTTGGAAGAAACCCAAAAGTGTGGAATGAACCCAACAAGTTCAACCCAAAACGCCACCTAAAGAGTGATGGATCGATGACTGTTTTAGCTGAGCCTGATTTGAGGTTCATATCATTTGGCACTGGAAGACGAGGTTGTCCTGCTATCATGCTTGGCACCACCATGACCGTCATGCTATTGGCTCGGTTGCTCCATGGCTTCACTTGGAGTATACCTCCAAATGTATCTAGCATCAACCTTGCTAAGTCTTGTAATGGTTCTATGCTTGCTGAGCCACTCGTGGCAGTAGCAAAGCCAAGACTAGCAACAGAATTATATCACAAGCCTGTTTAG 1593 0.4049 MGSFLGLLWSHFQPFWFYLLVMISCFMIVKALRYRLFEKPKLPPGPESWPIVGTIPEMLANKPVFRWIHNLMREMNTEIACIRLGNVHVIPVTCPTIACEFFRKHDANFASRPLTMATDIISSGYKTIAIVPFGEQWMKMRRIFINDLFSPVRHQWFHDKRNEEADNIIFYLYNKCKNVNYGGLVNVRNVAQHYCCNVMRKLIFNTRYFGNGGEDGGHGFEEEEQVDVIFMLLKHVYAFSISDYVPFLRMFDLDGHKRIVKNGMRIMKKYHHPIIEKRMKQWNDGSNTVEEDLLDVLISLKDVNNNPLLTLKEIEALTIELMLGGADNPSNAIECALAEMINQPELLQHATEELDKVVGKKRMVEESDIPKLNYVKACLREAFRLHPIIPFNPPHVSTHDTVVANYFIPKGSHVLLSRHGLGRNPKVWNEPNKFNPKRHLKSDGSMTVLAEPDLRFISFGTGRRGCPAIMLGTTMTVMLLARLLHGFTWSIPPNVSSINLAKSCNGSMLAEPLVAVAKPRLATELYHKPV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1897 530 Gene3D Cytochrome P450 37 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 Pfam Cytochrome P450 43 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Apr10g1897 530 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 16 526 - -
Apr10g1897 530 SUPERFAMILY Cytochrome P450 43 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1897 530 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1897 Apr-Chr10 32001822 32004365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1897 8 526 Cytochrome P450 AT4G39950 53.269 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1897 - K12153 gmx:100787378 859.751