Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1896 ATGCCTTTGCTTTTGTTGTCACAACTTCAAGGCTTCTGGCCTTCTTTGCTTGCTGTAATCACTGGCTTTATTATGATCATCAAAGCCCTAAGATCTGACTTGATTCAGAAATATTCCACGAAACAAAAGCCAAAACTCCCCCCAGGTCCCAAACCATGGCCTATAATTGGTAACCTTCCTGAAATGCTTGCAAACAAACCTGTGTATAAGTGGATACACAAACTCATGAAAGAAATGAACACTGAAATTGCATGTATCCGCTTAGGAAATGCCTATGTTATCCCAGTGACATGTCCTACCATAGCCACTGAGTTCTTGAGAAAACAAGATGCAACTTTTGCATCAAGATCACTAAGCATGAGCACTGATCTCATTACTAGTGGATATTCTACCACAATTTTTGTGCCCTTTGGGAACCAATGGAAGAAAATGAAGAAAATAATAACCCATGATTTGCTTTCCCCACAAAAGCACCAATGGCTTCATGACAAAAGGGCTGAAGAAGCTAACAACCTAATTTTTTACGTCTACAACAAATGCAAAAATGTGAACTATGATAATGGTGGTGTTGATGGTGGCCTGGTGAACATTAGGAGTGCTGCAAGGCATTATTGTGGTAACTTGATCAGGAAAATTATTTTTAACACAAGATATTTTGGGGAAGGTAGAAATGATGGAGGTCCTGGTCTTGAGGAAGTGGAACATGTTGATTCCATCTTCGATTTGCTTAAGTATGTTTATGCCTTTTCTCTTTCTGATTATATGCCATGTTTGAGGGGACTTGACTTGGATGGCCAGGGAAAGAAGGTGAAAGAAGCTTTGAGGATCGTGAATAAGCATCATGATCCCATCATTGAAAAGAGAATGAAACAATGGAATGATGGATTAAAGGTTAATGAAGAGGATTGGCTTGACATTCTACTCTCCCTGAAAGATGCAAACCACAACCCATCATTGACATTGGAGGAAATCAAAGCGCAAATTATAGAACTAATGCTTGCAACAGTGGACAATCCATCAAGTGCTTTTGAATGGGCACTGGCTGAAATGATAAACCAACCAGAGTTACTCCAACGAGCGACGGAAGAATTGGACAGTGTAGTGGGGAAAGAAAGGCTTGTTCAAGAATCAGACATTCCAAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCCATTGCACCTTTCATTCCACCCCATGTCTCTATGAGTGACACTGTTGTGGGAAAGTACTTCATCCCTAAGGGTAGCCATGTAATGCTAGGAAGGCAAGAACTTGGGAGGAACCCAAAAGTGTGGAATGAACCCCTCAAGTTCAAACCTGAACGACACCTCAAGAGTGATGGATCGGATGTCGCTTTGACAGATCCAGATTTGAGGCTCATGTCATTCAGTACTGGAAGACGTAGTTGTCCTGGAGTGATGCTTGGCACTACTATGACTGTGATGCTATTTGCTAGGTTGCTTCATGGCTTCACTTGGAGTGCACCACCCAATGTTTCAACAATTAACCTTGCTGAGTCCAACGATGAAATCCTTCTTGCTGAGCCACTTGTGGCAGTGGCAAAACCAAGATTAGCACCAGAACTATACCACCTTTAA 1617 0.4181 MPLLLLSQLQGFWPSLLAVITGFIMIIKALRSDLIQKYSTKQKPKLPPGPKPWPIIGNLPEMLANKPVYKWIHKLMKEMNTEIACIRLGNAYVIPVTCPTIATEFLRKQDATFASRSLSMSTDLITSGYSTTIFVPFGNQWKKMKKIITHDLLSPQKHQWLHDKRAEEANNLIFYVYNKCKNVNYDNGGVDGGLVNIRSAARHYCGNLIRKIIFNTRYFGEGRNDGGPGLEEVEHVDSIFDLLKYVYAFSLSDYMPCLRGLDLDGQGKKVKEALRIVNKHHDPIIEKRMKQWNDGLKVNEEDWLDILLSLKDANHNPSLTLEEIKAQIIELMLATVDNPSSAFEWALAEMINQPELLQRATEELDSVVGKERLVQESDIPKLNYVKACAREAFRLHPIAPFIPPHVSMSDTVVGKYFIPKGSHVMLGRQELGRNPKVWNEPLKFKPERHLKSDGSDVALTDPDLRLMSFSTGRRSCPGVMLGTTMTVMLFARLLHGFTWSAPPNVSTINLAESNDEILLAEPLVAVAKPRLAPELYHL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1896 538 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1896 538 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1896 538 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1896 538 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1896 538 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1896 538 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1896 538 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1896 538 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1896 538 Pfam Cytochrome P450 47 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1896 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Apr10g1896 538 SUPERFAMILY Cytochrome P450 47 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1896 538 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 536 - -
Apr10g1896 538 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 14 536 - -
Apr10g1896 538 Gene3D Cytochrome P450 39 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1896 Apr-Chr10 31993175 31996592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1896 3 536 Cytochrome P450 AT4G39950 52.710 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1896 - K14984 gmx:100809902 905.59