Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1894 ATGAACAAAAGAAAAGAGGAACTGTCAAAAGGATTTCTAAGCTCTACTAATGACATGCTTTCATGTCTACTTGCATTAAGGGATGAAAATCATCAGCCTCTAGCTGATGATTTGATTGCTGACAATTTTATTTTTCTATTTGTTGCTAGCCATGACACATCTGCTACTCTTATGAGCTTGATGATATGGAAGTTATCTAAAGATCCTGAGGTTTACAATAAAGTTTTAGAAGAGCAAATGGAAATTATAAAGCAAAGGGAAGGAACAGAAGAGAGGCTAACATGGACTGAGATACAAAAAATGAAATACACATGGAGAGTTGCTCAGGAATTGATGAGGATGATGCCACCATTGTTTGGTAGCTTCAGAAAAGCACTTCAAGACATTACCTATGAAGGATATGACATACCAAAAGGGTGGCAGGTGTATTGGGCAGCATGTGGAACGCATATGAACAATGGTATATTCGAGAATCCACACAAGTTTGATCCATGTCGTTTTGAAAATCCAACCAAGCCAATTCCACCTTTTTCTTACATTCCATTTGGTGGAGGGCTTCATTATTGCATTGGAAATGAGTTTGCCAGGGTTGAGACATTGACTACTATTCACAACTTTGTAAAGATGTATGAATGGTCACAAGTAAACCCAGAGGAGCCAATTACTCGTCAACCAATGCCATATCCATCCATGGGTCTCCCAATTAAGATCAAACCCAGATGCAATATGTCTTAG 735 0.3837 MNKRKEELSKGFLSSTNDMLSCLLALRDENHQPLADDLIADNFIFLFVASHDTSATLMSLMIWKLSKDPEVYNKVLEEQMEIIKQREGTEERLTWTEIQKMKYTWRVAQELMRMMPPLFGSFRKALQDITYEGYDIPKGWQVYWAACGTHMNNGIFENPHKFDPCRFENPTKPIPPFSYIPFGGGLHYCIGNEFARVETLTTIHNFVKMYEWSQVNPEEPITRQPMPYPSMGLPIKIKPRCNMS* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1894 244 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 238 - -
Apr10g1894 244 PANTHER CYTOCHROME P450 26 1 238 - -
Apr10g1894 244 PRINTS B-class P450 signature 106 117 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 PRINTS B-class P450 signature 123 150 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 PRINTS B-class P450 signature 151 166 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 PRINTS B-class P450 signature 180 189 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 PRINTS B-class P450 signature 189 200 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 SUPERFAMILY Cytochrome P450 2 240 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 Gene3D Cytochrome P450 1 240 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 PRINTS P450 superfamily signature 49 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 PRINTS P450 superfamily signature 106 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 PRINTS P450 superfamily signature 180 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 PRINTS P450 superfamily signature 189 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 Pfam Cytochrome P450 2 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1894 244 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 182 191 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1894 Apr-Chr10 31960697 31961779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1894 14 215 Cytochrome P450 AT4G19230 42.574 1.21e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1894 - - aprc:113851595 517.309