Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1892 ATGGCCACACAGATGCAAGATCCATCTTCAAACCCTAACCCTAATCCCAATGCCACGTCAGCAACTCCATCTTCTACCTTATTTATACGCGCCGCCGGCAACGGCGCTTCTGCCATTCCCGTCGCCGGTTCCGGCGAGTCCCACTCTCATCACCGGCGGGCGCACTCCGAGGTCAGTTTCCGGCTGCCGGAAGACATTATGGACCTGTCGCCGTCCGATCCGTTCAACGGCGGATCCTCCACAGCGAGCCTGGAAGAGATCGGATCCGAGGACGACCTTTTCTCCACCTACATTGACGTGGAGAAGCTTGGAGGAGGCACGAATGGTTCAGGTCGTGCTGGAAACGGATCGGATCAGAGCGGTTACGGAAACGGCGCCGGCATGAGCGGCCACAACGACAGTGAGAAGAGTCCGAGCGCCGCCGCGGCGAGACCGAGACACAGGCACAGTAGTTCCGTCGACGGTTCCACGTCGACGAGCATGTTTGGAGAGATCATGGAGGCGAAGAAAGCCATGCCTCCTGATAAACTCGAAGAGCTTTGGACGATCGATCCAAAGCGTGCTAAGAGAATACTGGCTAATCGGCAATCTGCTGCGCGTTCAAAAGAAAGGAAGGCCCGCTACATACAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACCGAAGCCACGACACTTTCTGCCCAACTCACATTGTACCAGAGGGATACAACTGGTCTTAGCACTGAAAATACTGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAGGCACAGCTTCGTGATGCTCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACTGGGGAGGCAATGAACCCCTCTGAATCTTTTAATCTAGGAATGCACCATATGCCGTATGCAGGGTCAAATTTCTTTTCAATGCCACCACATTCAGCTCCTTCAGGTCACCCCAACATACAGTTGCCACCATTTGTTCACACCCCATCTAGCATGCCAACTCATCAGCTACAACAAACAAATTCTCACCAAATCCCAGATATATTGCAAAATGACCAGCTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCATCCGTGGTGAAGTCTGAAGGGCCCTCAATATCTGCAAGTGAGAGTAGCACTACGTTTTGA 1155 0.5212 MATQMQDPSSNPNPNPNATSATPSSTLFIRAAGNGASAIPVAGSGESHSHHRRAHSEVSFRLPEDIMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVEKLGGGTNGSGRAGNGSDQSGYGNGAGMSGHNDSEKSPSAAAARPRHRHSSSVDGSTSTSMFGEIMEAKKAMPPDKLEELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEAMNPSESFNLGMHHMPYAGSNFFSMPPHSAPSGHPNIQLPPFVHTPSSMPTHQLQQTNSHQIPDILQNDQLGRLQGLDISSKGSSVVKSEGPSISASESSTTF* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1892 384 SMART brlzneu 182 246 IPR004827 GO:0003700|GO:0006355
Apr10g1892 384 Pfam bZIP transcription factor 186 241 IPR004827 GO:0003700|GO:0006355
Apr10g1892 384 SUPERFAMILY Leucine zipper domain 186 237 IPR046347 GO:0003700|GO:0006355
Apr10g1892 384 MobiDBLite consensus disorder prediction 105 159 - -
Apr10g1892 384 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 381 - -
Apr10g1892 384 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 247 IPR004827 GO:0003700|GO:0006355
Apr10g1892 384 MobiDBLite consensus disorder prediction 322 338 - -
Apr10g1892 384 Gene3D - 185 238 - -
Apr10g1892 384 Coils Coil 202 229 - -
Apr10g1892 384 MobiDBLite consensus disorder prediction 46 62 - -
Apr10g1892 384 MobiDBLite consensus disorder prediction 1 83 - -
Apr10g1892 384 CDD bZIP_plant_RF2 187 236 IPR044759 GO:0003700|GO:0006355
Apr10g1892 384 MobiDBLite consensus disorder prediction 307 338 - -
Apr10g1892 384 MobiDBLite consensus disorder prediction 363 384 - -
Apr10g1892 384 MobiDBLite consensus disorder prediction 1 31 - -
Apr10g1892 384 MobiDBLite consensus disorder prediction 110 136 - -
Apr10g1892 384 PANTHER BZIP TRANSCRIPTION FACTOR 1 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1892 Apr-Chr10 31951818 31955061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1892 5 384 bZIP Transcription Factor Family AT2G40620 50.123 4.28e-103 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr10g1892 bZIP_1 7.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1892 - - gmx:100775607 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1892 10 31951818 31955061 Apr9g1223 9 21823580 21825858 PCT