Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1883 ATGGCAGACATTGGAGCTGAGTTTGTAAAATCAATTTTAGGCAGATTGATAAACTGCGCAATAGCAGAATCACATTACGTATGCTGCTTTTCGGACATTGTTGAAGACATTGAAAAGGAAAAGAAAGCTTTGGAAGAAAGTGTGAAAGAGGAAATAAGAAAGGGAAATAGCACTCGAACAGATGTCACTTCTTGGCTAAAAGAAACTGACGAACTCATTAAAGACACAAAGATGAAAAAGACGTGTTTTTTTGGATGGTGTCCAAATTGCAAATGGAGATATAATAAGGGAAAGCAACTGGCAAATAAGAATATGGAAACTGAAAGACTCTTGAAAAGTGGCAATGTTGGAATTTCTCCTTATCTTCCAGGTGTTGAGTATCATTCTTCTCAAGATTATGTTTCTTTTGAGAGCAGAAAGTCGAAAATCAAAGAACTTTTGGATGCGCTAAAAAATGACAGCAACTTTATAATTGGATTGCAAGGGATGGGGGGAACAGGTAAAACTACGTTGGCAAAAGAGGTGGGTAAGGAACTTAAGCAGTTACAACAATTTGATCATGTCATTGATACTACAGTGTCATATACTCCTGATATAAGAAAGATTCAAGATGACATTGCTGCACCCTTAGGATTAGATTTCAAGGATAAAAATGAATCAGAGAGACTCAAGCTTCTTTGGAGTAGATTAACCGGTGGTGAAAAAATTCTTTTGATATTGGATGATGTGTGGAATCCTATCAATTTTGATGAAATTGGGATTCCAAGGAAAGACAATCACAAGGGTTGTAGAATCTTTTTAACCACACGTGAAATGAAGGTTTGCCAATTAATGGGTTGCGAAAAGATAATTCAGTTGGGGGTGTTATCTGAGGAAGATGCATGGACCTTGTTCAAAAAGCATGCTCATATAAGTGATAGTTCCTCTAAACGTTTGTTGGATAAGGGACGCGATATTACCAAAGAATGTAAAGGGTTACCAGTTGCAATAGCAGCCATTGCTAGCAGTTTAAAAGGTGAAGAAAGTGTGGAAGTGTGGAAATCAACTTTAAAATCCTTGCAGAAGGCTGTTGATGAAGATTTGGTTGATAAATGTTTGAGGCGTAGTTATGATAATTTGAAGGATGAAGGAGCCAAGAAACTATTCCGCTTATGTTCTCTGTTCCCAGAAGATGAAGAACTTTCTGATGAAATTTTAACAAGATTTTGCACTGGAGTGCGCCTTTTTGGGGAAGTGGATAACAAATACGATGAAGCACGAGACCAAATAGTTACTGCCAAAAATAAACTTGTAAATTCTTGTTTATTGGTAAAAGCTGGGAATGAAAGTGTGAAAATGCATGACTTGGTTCGTGATGTGGCCTTGCGGATAGCTAATGAAGAAATTCAAGCAGTAAATGTGTCTAAAAACAATCAGAAGTTATTGGTTGAGAGGAGGAAGAATATTAAATATTTGTTATGTGAAGGGAAGAGTATGGATGTATTTTCATGTAAGTTTGATAGCTCTAAACTTGGGATTCTGAATGTCTACATGGATGAAGATAGAGATCAAGATGATTGTGTGGAAGTTCCAAATTCATTCTTTGAAAATATGACACAACTTCGAGTTTTGCATTTGTCATTTAAGACATGGAGATATGTTTCTCTATCATTACCACAGTCATTCCAATCATTGACTAATATTCGATCTCTAATCCTTGTGAGATTACTCTTACGGGACTTCTCTGTTCTGAAAAACTTACAAAATCTTGAGACTTTTGATTTGGTTTGGTTTTATATGGATGAATTACCACGTGAAATTGAAAAACTGGAGAAACTTAGAGTCTTGAGGTTAAGACGTGGTATTGTTAAAAATTTGAATTCAATTAAAGTGATTGAACGGTGCTCATCACTTGAAGAATTGTACATTGTTGGTATGAATCTCACGTTTGATACTTCGGCAATGCATGAGAAAATAACCTTTCCGGCACTCCAAAGGTACATTATGAGTGACAATCGTACAATGGGGGATGAATCCTTGTCAAAATGTGTGGCCTTTCCGAAGATTGATGCTATTTTCTCGGAAGTGACATTCAAGCATTTGTTGCAAACATCCGAACTTCTTCATCTACGAGAAATCGAGGGGGAATGGAGAAATCTCATACCTGATATTGTTCCCATGGATAGAGACACAGTTTCTTCTCCAAGTTGA 2190 0.3662 MADIGAEFVKSILGRLINCAIAESHYVCCFSDIVEDIEKEKKALEESVKEEIRKGNSTRTDVTSWLKETDELIKDTKMKKTCFFGWCPNCKWRYNKGKQLANKNMETERLLKSGNVGISPYLPGVEYHSSQDYVSFESRKSKIKELLDALKNDSNFIIGLQGMGGTGKTTLAKEVGKELKQLQQFDHVIDTTVSYTPDIRKIQDDIAAPLGLDFKDKNESERLKLLWSRLTGGEKILLILDDVWNPINFDEIGIPRKDNHKGCRIFLTTREMKVCQLMGCEKIIQLGVLSEEDAWTLFKKHAHISDSSSKRLLDKGRDITKECKGLPVAIAAIASSLKGEESVEVWKSTLKSLQKAVDEDLVDKCLRRSYDNLKDEGAKKLFRLCSLFPEDEELSDEILTRFCTGVRLFGEVDNKYDEARDQIVTAKNKLVNSCLLVKAGNESVKMHDLVRDVALRIANEEIQAVNVSKNNQKLLVERRKNIKYLLCEGKSMDVFSCKFDSSKLGILNVYMDEDRDQDDCVEVPNSFFENMTQLRVLHLSFKTWRYVSLSLPQSFQSLTNIRSLILVRLLLRDFSVLKNLQNLETFDLVWFYMDELPREIEKLEKLRVLRLRRGIVKNLNSIKVIERCSSLEELYIVGMNLTFDTSAMHEKITFPALQRYIMSDNRTMGDESLSKCVAFPKIDAIFSEVTFKHLLQTSELLHLREIEGEWRNLIPDIVPMDRDTVSSPS* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1883 729 Gene3D - 288 374 IPR042197 -
Apr10g1883 729 Gene3D - 125 285 IPR027417 -
Apr10g1883 729 PRINTS Disease resistance protein signature 157 172 - -
Apr10g1883 729 PRINTS Disease resistance protein signature 230 244 - -
Apr10g1883 729 PRINTS Disease resistance protein signature 323 337 - -
Apr10g1883 729 CDD AAA 143 269 - -
Apr10g1883 729 PANTHER PHOSPHATASE, PUTATIVE-RELATED 34 636 - -
Apr10g1883 729 SUPERFAMILY L domain-like 445 677 - -
Apr10g1883 729 Pfam NB-ARC domain 139 370 IPR002182 GO:0043531
Apr10g1883 729 Coils Coil 34 54 - -
Apr10g1883 729 Gene3D Ribonuclease Inhibitor 456 695 IPR032675 -
Apr10g1883 729 PANTHER - 34 636 - -
Apr10g1883 729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 385 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1883 Apr-Chr10 31887771 31890045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1883 158 630 WRKY Transcription Factor Family AT5G45050 26.166 8.29e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1883 - - aprc:113851231 1431