Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1882 ATGGAGGGCATTGCATTTGATTGGGGAAAGAGAATAGTGGAAAATTTGGTGAACAATGCATTAGCAGAATCACGTTACATATGTTGTTTCACATGCATAGTTGAGGATTTTGAAAAGGAGAAGGAAACATTGAAAGCAAAAAGAACAACAGTGGAGCAATATGTTAAATTGGCAAATAGAAGAGCAGAAGATATTAGAAGAGATGTTGTTGTTTGGCAAGAGCAAGCTGATAAACTCATTGAAGAAGACACCAAAACAAAAGAACAAACATGTCTTTTTGGATGGTGTCCTAATTGCAAATGGAGATACAACAGAGGAAAAGAACTAACAAATAAGGCATTGGAGATGAAAAGACTCATGCAAAGTAACTTTGAAAGTGTTGGAATCACTCCTAATCTTCCAGATGTTGAATATCATTCTTCTCATGATTACATTGCTTTTAAAAGTAGAGAGTTGAAATACAAAGAACTATCAGATGCACTCATAGATTACAGTAGTTATATAATTGGATTACAAGGGATGGGAGGCACAGGTAAAACTACATTGGCAAAAGAGTTGGGTAAGGAACTTAAGCAATCCAAGCAATTTGATCTTGTCATCGATACTACAGTGTCATACACTTCCGATATAAAAAAGATACAAGATGATATTGCAGCACCCTTAGGATTGGATTTGAAGAATTATAATGAATCTGAGAGACCAAGAATATTGTGGAGTAGATTAACTAGTGGTGAGAAAATTCTTCTTATACTGGATGATATGTGGGGGCATGTAAATCTTGAAGAAATAGGGATTCCTGATAGTGATAGTCATAAGGGTTGTAGGATTCTTTTAACCACACGAAATTTATGGGTATGCAAATCACAAGGGTGTGAGAAGATTATTCAACTAGAGCTCTTATCTGAAGAAGATGCATGGATCTTGTTCAAGAAGCATGCAGGTATAAGTGATAGTTCATCTAAACGTTTGGTAGACAAGGGGAGAAAGATTGCTAAAGAATGCAAAGGATTACCAGTTGCAATTGCAGCTATTGGTAGCAGTTTAAAAGGGCAACAACATCAAGAAGAATGGAATGCAGCCTTAAAGTCCTTGTTGAAGTTTGTGCCTATGCATGGTGTTGATGAAAATATGGCTCCAATATATAAATGTTTGAGGTATAGCTATGATAATATGAACAATGAAAGTGCTAAGAGATTGTTTCTCTTGTGTTCTATGTTTAAAGAAGATGAAGAACTTTCTATTGAAATTTTAACCAGGTTTGGCATAGGAGCTGGCCTTTTTGGAGAAATAGATGAGAAATATGATGATGCTCGAAGTCAAGTGGTTGTAGCCAAAAATAAACTCATAGATTCTTGTTTATTGTTGAAGGGTGGGGAAGGACGTGTGAAAATGCATGACTTGGTTCGTGAAGTGGCCCTATTGATTGCTAACAAAGAGATTCAAGTCGTAAATGTGTCTAACAAAAATCAAAAGTCACTGATAGAAAGGGAAAAGAATATTAAATATTTGTTATGTGACGGCAAATGCATGGATGTGTTTTCTTGTAAGTTTGATGGTTCCAAACTTAAGATTCTAACTATCTACATGGATGATAAAGGAGAGGACTCTATGGAAGTCCCAAATTCGTTTTTTGAAAACATGACAGGGCTTCAAGTTTTGTGTTTATCTAATAAATCTTTGCTGAGGGAAACTTTATCATTATCATTGTCAATTCAATCGTTGATGAATATTCGATCTCTTGTCCTTGAAAGATTTAAATTAGGTGACATCTCTTTTCTGGGGAACTTAAAGAGCCTTGAGACTCTTGATTTGGTTCGTTGTTTCATTGATGAATTAGCAAGTGAAATTGAGAAACTAGAGAAACTTAGATTGTTGAAGTTGGACCGTTGTGAAATTAGAAGGAATGGTTCATTTGAAGTGATTGAAAGATGCTTGTCACTAGAAGAATTGTATATTACTGTTGACCCTATCTCCAAGGTTGATAGTGCTGCAATTTATCAAATAAGAAATATTCCTATATTGCAAAGATATTGTTTAACAAATCGGTATGTTTTTGAGAAAAATGATTCAATGTTAAAATGTGTGCATTTTTCAGAGATCAATGCCTTGTTCTCAGAAACAGCAACATTTAAGTATCTTGTGCAAACTGCAGAAATTCTTGACCTGCGAGGAATTGAGGGGAGATGGAAAAATCTCATACCTGAGATTGTTCCAATAGATAAAGGTATGAAAGATTTATCTCATCTTGATTTGACATCTTTTTCTAAATTACAATGCCTCATTGATACTAGACTTGTTTATTCTCAAGAACAAATTGTCTTTCCCAAGTTGGTTGTGCTAACACTTAAAAATATGGATGATTTGAGAGAATTATGCAATGGTCCCATTCCTTTTCACCTTTTGAAGAGTTTAGAGAGGCTATTTGTCTTTAATTGTCATCTTCTGCAAAGTATATTATTTAAGGGCAAGCTAAACCTTTGCAATGTTAAGACTATGAGATTGTCCAATTGTCCAAGGTTGGAATCCCTTTTTCAACTCTCAACTTCTCAAAGCCTAGTGTTGTTGGAGGAATTGGAAATACATGATTGTGAGCAACTAAAACATATAATAACAGAAGAAGAAATAATTGATGGCATGAATGATAACAAGAGTGGTGGCTCCATGTTTCCAAATTTGAAAACTCTTGATATCATGGAATGTCCTGAATTAGAAGTTATACTTCCCTTCATTTCTGATCAAGATCTTCCTCTACTAGAAGCTATCAATATATATGATTGTGATGAGCTAAAATACATATTTGGCCAATATCAACATCAACATGAAAGCCAAGGCTTGGTAAAAGATGTTGTACTTCATTCACTAAAAGAAATGGAGCTCTCTGGCTTGCCAAATTTCATTGACATTTTTCCTGAATGTCATCATCCCATGTGTTCCTCCGTCAAGAAGATATATTCTAGAAATGGTTCTAAGGCACAAAAACAGTTGAACCCCATCAAAGGTAGTATCACCCCCTGGATGCATATATGTTGTTATGCTCATAAATATAGACACAAACTGAGGAATGCCACAAGTACTAAATCCTCATTAGTTTCCAAGGATCAGTCACAAGATGACTCTGTCTCATCGGTTCTGGATTCAAACACTCTTCAACTTTGGAGAAGTGCTCAATGTCTTTCCAAACAGTCACAGATCCTACGCAATATTAAAGAGCTTGTACTACAATATCTTTCGAAGATAGAATTCATATTTAGCCTATCTATTGCTCCAACAATGTTGGTAGAAACTTTGAGAATTAGACATTGTGACGAATTAAAGTTCATAATAATAGACATTGGAGATGATCGTGGTGGCAATGATTGGAGCATTGTGTTCCCAAAATTGAAAGAGCTCTATGTGAAAGGATGTGAGAAATTGGAATATATATTTGGAAACTACCCTGATAATCATAAAAACCAGAATGAAATTCATTTTCATCTTCCAGTATTAGAATGTCTTAAGTTTCGCTTTTTGCCAAATTTGATTGGCATGTGTCTTGAAAATTACCACCCAAGAGTGTCATCTTTGACGGTGTTTGAACTCAATGAATGCCCCAACTTTACCATTAAATCTATTGGGGATTTGACTGTTCATTCGGATCCAAGTCAATTGGATGGCAACCTCATCAAGGACTTGAGTGAGCACATGAAGCATTTTTCCACTTTGGGAGATCTCCAAGTACATAACTCCAAAGCAGAAAATATTTTTTGTTTTAGTGAAATAATTGTACAACCAATAAACTTAGGATTACACAGCATTCAGTTGAGTAATTTGTCTCAAATGACATATCTTTTTGTAGGTCCTGAAAATTCTTTTACCCTCCAAAACCTTACAAAGCTAAATATTGTGCGATGTGAAAAATTGGAGATTATATTTCCAGCTTCTGTTTCAAGATGCCTACCACATTTGCATGATTTAATCATAGACGAATGCAAAGAATTAAAGCAGATCATTGAAGAGGATGTGGGAAATTCAAAAATGTCAAATTATCTTACCCTAAGGACATGTTTCCCAAAGCTAGCAGTACTCGTGGTCAAAAAATGCAACAAGCTGAAATGTATCTTTCCTATCTCCAAATTTAGAGAGCTTCCCATGCTAGAAATTTTGATGATAAAAGAAGCGTTGGAATTAAAGGAAGTATTCAGATGCAAAAAAGGTGATCATAAAGTTGAGCTTCCAAATTTAAAAATGGTACTACTTGTTGAACTACCAAGCCTCAACCAGGATATTCAATTCCATGCCATAGAGCATAGTTTAGTCCAGAATTGTCCAAAATTTGCTTTGACTTCAACATTAACTATGGACAGCTTGAAGCTGGCCGTTGATGAAGTGTTTGGGATGGACTGGTTTATCAAGATCATGCTACAAAACATGATTCGTGAACTTGAAGACTCTGGAACCCAGTATGCTAACAATGAAAACCTTGTTGTGAATAACTCTTCCATTGAACCTGAAGTTCTAGCAGCATCAAAGCATGAGTTGACTTCTTCACAGGTCAACGAAAATCAATCTATTCAAGCAGACCAAGATGAATATATGCAACAAGGAAATGACATTAAGTCTAATGAGTTCATTTCTGTGGAAACAAAAGGCAAACCAACACTAGAGGTAGAGCATGATTTTGTGGAAAAAGTTAATGCTTTAGAAATTCCCATAACAACAATTTCACCAACAAATTTAGCAAATGCCAAGACAAGTCCTTTGGATATTACTCCACAAAAAACCTATTCATATGAGTTTCTGGACGAACAACCAATGGGAGAACATTCTTCAATGAAAGAACGACAGCCACTTGGAAAGACTGAGATTATTTTTGAAGTTCCTCAAGGAAATAATGGAATGCAACCACCTAACTATTATTTGAAAGATAGAGAGAACCAAAGTACTCAAGGAGATTCTATGTCAGGGAAAAATACAACAGCAACTCCACTGATGAAGTCGGAAACAAGGAACAGAGCACTAGGAACATTAGTATCTCCTTTACAAAAGGGTATTAAGAGAAATGTTGAAGAAGGAACTACATCAGCGAATTTCAAGTCTATAACATCATCAACTCGTTCAGAACTAGTTAGTTCATCATTAGGTCAATCAGTTGCTTCTAAGGAGGAAACATATCGACATGAACATGGTGATGGCCAAATGACCATACCATCTATTTTAGGTGTCACTACAGAGCCTCCCTATGCTCAAGAAACTTCAGAGACAGTGGTTGCCCTTACTAACTGTCATGATCCAGTTTCTTTGAATGGTGATGCTTCCATGAAAGTAAGCTCAATTGTTGAGGAACTGTTTCTTAACAATGATGGCATAGGAGTTTCAGATTCTAAGCCCTTTCCTAGCATCCCTTCCCATGTTGTATCCAAGTCTCTTTCAATGCCATTTGATGGGAGCCCTTCTCAAAACATGGATGATGTGAGTTTTGCTTCTCTTGTCAAAAGTGAACTCGAGCAACTGGTCTCCAACAAGTATTTGGCTTCTGAGAACATGACTCTGTTGACTGAATTTTTGGCAAAGCATCCTTCTCTTCGTTTAAAAGACAATGCACTTAGTAACAAATACAAGGGTTATGCCTACACTTGTCTGGCTGAGCTACTGAAATTCCTCCAAATACATAGTGTGTTGGATGTGTTAGAGTCCAAGCACTCCAACTTTATGGAATTAATGCAAGACATGAGAAGTTTTAGTTTTGACAAGAATTGGTTAGATGGTGTTGAAAGACGTGCCTTGTTTCCTAGTTTAAAAGCATCTGAAGATGCATTGCAGAAATTACTGGACTCAAAACGCATTTTGACTCAGCATGTGAAGGATCTTAAGCATCAAGTGGCATCTTCTGAAGCTGTTTTGGAGAGTATAATTCAACAAGAGGCACAAGTATTAGAAGCTAGGGCTTCTTTGAGTGCCCCTCTTGGCTATTAG 5952 0.3609 MEGIAFDWGKRIVENLVNNALAESRYICCFTCIVEDFEKEKETLKAKRTTVEQYVKLANRRAEDIRRDVVVWQEQADKLIEEDTKTKEQTCLFGWCPNCKWRYNRGKELTNKALEMKRLMQSNFESVGITPNLPDVEYHSSHDYIAFKSRELKYKELSDALIDYSSYIIGLQGMGGTGKTTLAKELGKELKQSKQFDLVIDTTVSYTSDIKKIQDDIAAPLGLDLKNYNESERPRILWSRLTSGEKILLILDDMWGHVNLEEIGIPDSDSHKGCRILLTTRNLWVCKSQGCEKIIQLELLSEEDAWILFKKHAGISDSSSKRLVDKGRKIAKECKGLPVAIAAIGSSLKGQQHQEEWNAALKSLLKFVPMHGVDENMAPIYKCLRYSYDNMNNESAKRLFLLCSMFKEDEELSIEILTRFGIGAGLFGEIDEKYDDARSQVVVAKNKLIDSCLLLKGGEGRVKMHDLVREVALLIANKEIQVVNVSNKNQKSLIEREKNIKYLLCDGKCMDVFSCKFDGSKLKILTIYMDDKGEDSMEVPNSFFENMTGLQVLCLSNKSLLRETLSLSLSIQSLMNIRSLVLERFKLGDISFLGNLKSLETLDLVRCFIDELASEIEKLEKLRLLKLDRCEIRRNGSFEVIERCLSLEELYITVDPISKVDSAAIYQIRNIPILQRYCLTNRYVFEKNDSMLKCVHFSEINALFSETATFKYLVQTAEILDLRGIEGRWKNLIPEIVPIDKGMKDLSHLDLTSFSKLQCLIDTRLVYSQEQIVFPKLVVLTLKNMDDLRELCNGPIPFHLLKSLERLFVFNCHLLQSILFKGKLNLCNVKTMRLSNCPRLESLFQLSTSQSLVLLEELEIHDCEQLKHIITEEEIIDGMNDNKSGGSMFPNLKTLDIMECPELEVILPFISDQDLPLLEAINIYDCDELKYIFGQYQHQHESQGLVKDVVLHSLKEMELSGLPNFIDIFPECHHPMCSSVKKIYSRNGSKAQKQLNPIKGSITPWMHICCYAHKYRHKLRNATSTKSSLVSKDQSQDDSVSSVLDSNTLQLWRSAQCLSKQSQILRNIKELVLQYLSKIEFIFSLSIAPTMLVETLRIRHCDELKFIIIDIGDDRGGNDWSIVFPKLKELYVKGCEKLEYIFGNYPDNHKNQNEIHFHLPVLECLKFRFLPNLIGMCLENYHPRVSSLTVFELNECPNFTIKSIGDLTVHSDPSQLDGNLIKDLSEHMKHFSTLGDLQVHNSKAENIFCFSEIIVQPINLGLHSIQLSNLSQMTYLFVGPENSFTLQNLTKLNIVRCEKLEIIFPASVSRCLPHLHDLIIDECKELKQIIEEDVGNSKMSNYLTLRTCFPKLAVLVVKKCNKLKCIFPISKFRELPMLEILMIKEALELKEVFRCKKGDHKVELPNLKMVLLVELPSLNQDIQFHAIEHSLVQNCPKFALTSTLTMDSLKLAVDEVFGMDWFIKIMLQNMIRELEDSGTQYANNENLVVNNSSIEPEVLAASKHELTSSQVNENQSIQADQDEYMQQGNDIKSNEFISVETKGKPTLEVEHDFVEKVNALEIPITTISPTNLANAKTSPLDITPQKTYSYEFLDEQPMGEHSSMKERQPLGKTEIIFEVPQGNNGMQPPNYYLKDRENQSTQGDSMSGKNTTATPLMKSETRNRALGTLVSPLQKGIKRNVEEGTTSANFKSITSSTRSELVSSSLGQSVASKEETYRHEHGDGQMTIPSILGVTTEPPYAQETSETVVALTNCHDPVSLNGDASMKVSSIVEELFLNNDGIGVSDSKPFPSIPSHVVSKSLSMPFDGSPSQNMDDVSFASLVKSELEQLVSNKYLASENMTLLTEFLAKHPSLRLKDNALSNKYKGYAYTCLAELLKFLQIHSVLDVLESKHSNFMELMQDMRSFSFDKNWLDGVERRALFPSLKASEDALQKLLDSKRILTQHVKDLKHQVASSEAVLESIIQQEAQVLEARASLSAPLGY* 1984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1882 1983 MobiDBLite consensus disorder prediction 1635 1660 - -
Apr10g1882 1983 Gene3D Ribonuclease Inhibitor 1214 1418 IPR032675 -
Apr10g1882 1983 Gene3D Ribonuclease Inhibitor 690 994 IPR032675 -
Apr10g1882 1983 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 403 IPR027417 -
Apr10g1882 1983 SMART AAA_5 165 319 IPR003593 -
Apr10g1882 1983 MobiDBLite consensus disorder prediction 1693 1731 - -
Apr10g1882 1983 SUPERFAMILY RNI-like 1260 1384 - -
Apr10g1882 1983 Gene3D - 299 392 IPR042197 -
Apr10g1882 1983 PRINTS Disease resistance protein signature 168 183 - -
Apr10g1882 1983 PRINTS Disease resistance protein signature 241 255 - -
Apr10g1882 1983 PRINTS Disease resistance protein signature 334 348 - -
Apr10g1882 1983 PRINTS Disease resistance protein signature 887 903 - -
Apr10g1882 1983 PANTHER - 57 972 - -
Apr10g1882 1983 PANTHER - 1284 1414 - -
Apr10g1882 1983 Gene3D - 136 295 IPR027417 -
Apr10g1882 1983 Coils Coil 62 82 - -
Apr10g1882 1983 Gene3D Ribonuclease Inhibitor 460 683 IPR032675 -
Apr10g1882 1983 Coils Coil 34 54 - -
Apr10g1882 1983 Pfam NB-ARC domain 157 390 IPR002182 GO:0043531
Apr10g1882 1983 SUPERFAMILY L domain-like 460 967 - -
Apr10g1882 1983 MobiDBLite consensus disorder prediction 1693 1712 - -
Apr10g1882 1983 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1284 1414 - -
Apr10g1882 1983 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 57 972 - -
Apr10g1882 1983 CDD SIMIBI 168 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1882 Apr-Chr10 31856959 31864777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1882 169 818 WRKY Transcription Factor Family AT5G45050 23.009 7.13e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1882 - - aprc:113851230 3870.47