Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1880 ATGGAAGAAATTGGAGCTAAGTTGTCGAAATCAATTTTCGATAGATTGATGAACTGCGCTATAGCAGAATTACGTTACGTATGCTGCTTTTCGGACATTGTTGAAGACATGGAAAAGGAAAAGAAAGCTTGGGAAGAAAGTGTGAAAGAGGAAATAAGAAAGGGAAACAATATTCGAACAAATGTCACTTCTTGGCTAAAAGAAACAGAGGGACTCATTAAAGACACTCAGATTAAAAAGACGTGTTTTTTTGGATGGTGTCCAAATTGCAAATGGAGATATAGTAAGGGAAAGCAACTGGCAAAGAAGAAGAAGGAAACTGAAAGACTCTTGAAAAGTGGGAATGTTGGAATTTCCCCTCATCTTCCAGGTGTTGAGTATCATTCTTCTCAATATTACGTTTATTTTGACAGCAGAAAGCCGGAAATCAAAGAACTTTTGGATGCACTGAAAGATGACAACAACTTCACAGTTGGATTGCAAGGGATGGGGGGCGCAGGTAAAACAACTTTGGCAATAAAAGTGGCTAAGGAACTTAGGCAGTTGCAACAATTTCATCATCATGTCATATATACCACAGTGTCATATACTCCTGATATAAGAAGGATTCAAGATGACATTGCTGCACCCTTAGGATTGGATATCAAGGATAAAAGTGAATCAGAGAGACGCGGGCTCCTTTGGAGTCGATTAACCGGTGATGACAAAATTCTTTTGATATTGGATGATGTGTGGAATCCTATCAATTTTGATGAAATTGGGATTCCAAGGGAAGACAATCACAAGGGTTGTAGAATCTTTTTAATCACACGTGAAATGCGCGTTTGCCAATCAATGGGATGCGAAAAGACAATTCAATTGGGGGTGTTATCTGAGGAAGATGCATGGACCTTGTTCAAAAAGCATGCTAATTTAAGTGATAGTTCCTCTAAACGTTTGTTGGATAAGGGGCGTGATATTACCAAAGAATGCAAAGGGTTACCAGTTGCAATAGCACCCATTGCTAGCAGTTTAAGAGATCAAGAAAGTGTGGAAGTGTGGAATTCAACTTTAAAATCCTTGCAGAAAGGTGTTGGTGGAGATTCGGTTGATACTTGTTTAAGGCGTAGTTATGATAATTTGAAGGATGATGAGGCCAAGAAACTATTCCGCTTATGTTCTATGTTCCCAGAAGATGAAGAACTTTCAGATGAAATTTTAACAAGATTTTGCATTGGAGTGCGCCTTTTTGGGGAAGTGGATAACAAATACGATGAAGCTCGAGACCAAGTAGTTACTGCCAAAATTAAACTTGTAAATTCTTGTTTATTGGTAAAAGCTGGGAAACAGAGTGTGAAAATGCATGACTTGGTTCGTGATGTGGCCTTGCGGATAGCTAATGAAGAAATTCAAGCAGTAAATGTTTCCAACAAAAATCAGAAGTTATTGCTTGAGAAGAGGAAGAATATCAAATATTTGTTATGCGAAGGGAAGAGTATGGATGTACTTTCTTGTAAGTTTGATAGCTCTAAACTTGAGATTCTGAATGTCTACATGGATGAAGATAGAGATGAAGATGATTGTGTGGAAGTTCCAAATTCATTCTTTGAAAATATGACAGAACTTCGAGTTTTGCATTTGTCATTCAAGACATGGAGACATGTTTCTCTGTCATTACCGCAGTCATTCCAATCATTGACAAATATTCGATCTCTACTCCTTGAAAGCTTACTCCTAGAAGACTTCTCTGTTCTGAAAAACTTACAAAATCTTGAGACTTTGGATTTGGTTGGGTTTTATATGGATGAATTACCACGTGAAATTGCAAAACTGGAGAAACTTAGAGTCTTGAGGTTAAGACGTGGTGTTGTTAAAAATTTGAATTCAATTAAAGTGATTGAACGGTGCTCATCACTTGAAGAATTGTACATTGTTGTTAGCTATCGTAGAGTGATTGATACTGCGGCAATGCATGAGAAAATAACCTTTCCTGCATTCCAAAGGTACATTATGAAAGACAATCGTATAGTGATGGATGAATCGTTGTCAAAATGTGTGGCCTGGACGAAGATTGATGCTATTTTCTCAGAAGTGACATTCAAGCATTTGGTGCAAACATCCGAACTTCTTCATCTACGAGAAATCGAGGGGGAATGGAGAAATCTCATACCTGATATTGTTACCATGGATAGAGGTATGAATGACCTAATCGAGCTTTATTTATCAGAGAGTCCACAATTGCGGTGTCTCATTGACACTACACGTATTGATTCTCATAGACGAAGTTTCTTCTCCAAGTTGATTGAGCTACGACTTAGAGCCATGGACAATTTCGAAGAACTATGCAATGGTCCCTTTCCCTTTGACTTTCTAAACAATTTGCAGGGGCTAGTAATCTCGGATTGTATAAATTTGAGAAGCATATTGTTCAAGAGCAAGCTAAACCTCTGTTATCTTAAGACCATTGATTTGTACAAATGCCCAAAATTGGTATCCCTATTTCAATTGTCAACTTGTCAAAGCCTCTTGCTTTTGGAGGAACTGTCCATACATGATTGTGAGCAACTAAAAAACATAATAGTAAGAGTAAATGAAGAATTGAAGAACGAGATTGTTGGTGGTGAGAATGATAACAAGAGTTTACCAACACGAACATGCAAGTCATCAAGAGGCAAAGGATATCATACTTGGCTCACTGAAAGAGGTGCAGTTCTCTGGCTTGCCAAATTTCATTGA 2715 0.379 MEEIGAKLSKSIFDRLMNCAIAELRYVCCFSDIVEDMEKEKKAWEESVKEEIRKGNNIRTNVTSWLKETEGLIKDTQIKKTCFFGWCPNCKWRYSKGKQLAKKKKETERLLKSGNVGISPHLPGVEYHSSQYYVYFDSRKPEIKELLDALKDDNNFTVGLQGMGGAGKTTLAIKVAKELRQLQQFHHHVIYTTVSYTPDIRRIQDDIAAPLGLDIKDKSESERRGLLWSRLTGDDKILLILDDVWNPINFDEIGIPREDNHKGCRIFLITREMRVCQSMGCEKTIQLGVLSEEDAWTLFKKHANLSDSSSKRLLDKGRDITKECKGLPVAIAPIASSLRDQESVEVWNSTLKSLQKGVGGDSVDTCLRRSYDNLKDDEAKKLFRLCSMFPEDEELSDEILTRFCIGVRLFGEVDNKYDEARDQVVTAKIKLVNSCLLVKAGKQSVKMHDLVRDVALRIANEEIQAVNVSNKNQKLLLEKRKNIKYLLCEGKSMDVLSCKFDSSKLEILNVYMDEDRDEDDCVEVPNSFFENMTELRVLHLSFKTWRHVSLSLPQSFQSLTNIRSLLLESLLLEDFSVLKNLQNLETLDLVGFYMDELPREIAKLEKLRVLRLRRGVVKNLNSIKVIERCSSLEELYIVVSYRRVIDTAAMHEKITFPAFQRYIMKDNRIVMDESLSKCVAWTKIDAIFSEVTFKHLVQTSELLHLREIEGEWRNLIPDIVTMDRGMNDLIELYLSESPQLRCLIDTTRIDSHRRSFFSKLIELRLRAMDNFEELCNGPFPFDFLNNLQGLVISDCINLRSILFKSKLNLCYLKTIDLYKCPKLVSLFQLSTCQSLLLLEELSIHDCEQLKNIIVRVNEELKNEIVGGENDNKSLPTRTCKSSRGKGYHTWLTERGAVLWLAKFH* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1880 904 Gene3D Ribonuclease Inhibitor 454 646 IPR032675 -
Apr10g1880 904 Gene3D - 371 453 IPR036388 -
Apr10g1880 904 Gene3D - 289 370 IPR042197 -
Apr10g1880 904 SUPERFAMILY L domain-like 446 863 - -
Apr10g1880 904 PRINTS Disease resistance protein signature 157 172 - -
Apr10g1880 904 PRINTS Disease resistance protein signature 231 245 - -
Apr10g1880 904 PRINTS Disease resistance protein signature 324 338 - -
Apr10g1880 904 PRINTS Disease resistance protein signature 807 823 - -
Apr10g1880 904 Gene3D Ribonuclease Inhibitor 674 869 IPR032675 -
Apr10g1880 904 PANTHER - 78 872 - -
Apr10g1880 904 Gene3D - 127 287 IPR027417 -
Apr10g1880 904 Coils Coil 34 54 - -
Apr10g1880 904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 386 IPR027417 -
Apr10g1880 904 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 78 872 - -
Apr10g1880 904 Pfam NB-ARC domain 142 371 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1880 Apr-Chr10 31832340 31835206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1880 158 852 WRKY Transcription Factor Family AT5G45050 23.784 3.20e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1880 - - aprc:113851228 1770.36