Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1879 ATGGCAAATATTGGAGTTGATTTGGTAAAATCAATTTTAGATAGATTGATGGATTGCGTAATAGCAGAATCACGTGACGTATGCTGCTTTTCGGACATTGTTGAAGACATTGAAAAGGAAAAGAAAGCTTTGGAAGAAAGTGTGAAAGAGGAACAAAGTAAGGGAAACAATATTCGAACAGATGTCACTTCTTGCCTAAAAGAGACTGACGAACTCATTAAAGACACTCAGATGAAAAAGACGTGTTTTTTTGGATGGTGTCCAGATTGCAAATGGAGATATAATAAGGCACAGCAACTGGCAAATAAGATGAAGGAAACTGAAAGATTCTTGAAAAGTGGCAATGTTGGAATTTCTCCTAAACTTCCAGGTGTTGAGTATCATTCTTCTCAAGATTACGTTTCTTTTGAGAGCAGAAAGTCGAAAATCGAAGAACTTTTGGATGCACTGAAAAATGACAGCAACTTTATAATTGGATTGCAAGGGATGGGGGGAACAGGTAAAACTACACTGGCAAAAGAAGTGGGTAAGGAACTTAAGCAGTTACAACAATTTGATCATGTCATTGATACTACAGTGTCATATACTCCTGATATAAGAAAGATTCAAGATGACATTGCTGCACCTATAGGATTGGACTTCAAAGATAAAAATGAATCAGAGAGACTCAAGCTTCTTTGGAGTAGATTAACTGGTGCAGAGAAAATTCTTTTGATATTGGATGATGTGTGGAATCCTATTAGTTTTGATGAAATTGGGATTCCAAGGAAAGACAATCACAAGGGTTGTAGAATCGTTTTAACCACACGTGAAATGAAGGTTTGCCAATCAATGGGATGCGAAAAGATAATTCAATTGGGGGTGTTATCTGAGGAAGATGCATGGACCTTGTTCAAAATGCATGCTAATATAAGTGATAGTTCCTCTAAACGTTTGTTAGATAAGGGACGTGATATTACCAAAGAATGCAAAGGGTTACCCGTTGCAATAGCAGCCATTGCTAGCAGTTTAAAAGGTGAACAACGTTTGGAAGAATGGAAATCAACTTTAAAATCCTTGCAGAAGTCCGTGCCTATGCATGGTGTTGATAAAAGTTTGATTGAAGTTTATAAATGTTTGAGGTATAGTTATGATAATTTGAAGGATGAAGAAGCCAAGAAACTATTCCTCTTATGTTCTATGTTTCCAGAAGATGAAGAACTTTCTAATGAAACTTTAACCAGATTTGGCATTGGAGCAGGCTTTCTTGGGGAAATGGATTGCAAATATGATGAAGCTCGAAACCAAGTAGTTGTTGCCATGAATAAACTTGTAGATTCTTGTTTGTTGTTGAAGGGTGGGAAACAAAGTGTTAAAATGCATGACTTGGTTCGTGATGTGGCCTTATGGATAGCTAACGAGGAAATTCAAGCAGTAAATGTGTCTAACAAAAATCAGAAGTTCTTGCTTGAGAGGAGGAGGAATATTAAATATTTGTTATGCGAAGGGAAGAGTATGGATGTATTTTCGTGTAAGTTTGATAGCTCTAAACCTGAGATTCTGAATGTCTACATGCATGAAGATGAAGATGAAGATGAAAATGCTTCTGTAGAAGCCCCAAATTCATTCTTTGAAAGTATGACAGAACTTCGAGTTTTGCATTTGTCATTTAAGACATGGAGATATGTTTCTCTATCATTACCACAGTCATTCCAATCATTGACGAATATTCGATCTCTAATCCTTGTGAGATTACTCTTACGGGACTTCTCTGTTCTGAAAAACTTACAAAATCTTGAGACTCTTGATTTGGTTTCGTGTCATATGGATGAATTACCACGTGAAATTGCAAAACTGGAGAAACTTAGATTGTTGAGGTTAAGACGTGGTATTGTTAAAAATTTGAATTCAATTAAAGTGATTGAAAGGTGCTCATCACTTGAAGAATTGTACATTGTTGGTATGAATCTCATGTTTCATACTTCGACAATGCATGAGAAAATAACCTTTCCTGCACTCCAAAGGTACATTATGAGTGACAATCGTACAATGGGGGATGAATCCTTATCAAAATGTGTGGCCTTTCCGGAGATTGATGCTATTTTCTCAGAAGTGACATTCAAGCATTTGGTGCAAACATCCGAACTTCTTCATTTACTAGAAGTCAAGGGAGAATGGAGAAATCTCATACCTGATATTGTTCCCATAGATAGAGGTATGAATGACCTAATCGAGCTTTATTTATCAGAGAGTCCACAATTGCGGTGTCTAGTTGACACTACACATATTGATTCTCATAGACACAGTTTCTTCTCCAAGTTGATTGAGCTAAAACTCCATCGCATGGAAAATTTCGAAGAACTATGCAATGGTCCCTTTCCCTTTGACTTTCTAAACAATTTACAGAGGCTAGATATCTGGGACTGTATAAATATGAGAAGCATAGTGTTTAAGAGCAAGCTAAACCTCTGCTATCTTAAGACCATTGAATTGTACAAATGCCCAAAATTGGTCTCCCTATTTCAATTGTCAACTTGTCAAAGCCTCTTGCTTTTGGAGAAACTGTCCATACATGATTGTGAGAAACTAAAAAACATAATAGCAGATGGTGAGAATGATAACAAGAGTTGTGCCTCAATGTTTCCTAATCTGAAAACTCTTGATATTAGCGAGTGTCCCCAATTGGAATATATACTTCCAACTCTTTCTACTCAAGTTGTTCCATTGCTAGAAACTATCATAACACGTGATTGTGGTGCGCTGAAATACATATTTCATCAATACCAACATGAACATGCAAGTCATCAAGAGGCAAAGGATATCATACTTGGCTCACTGAAAGAGGTGGAGTTCTCTGGCTTGCCAAATTTAATTGATATTTTTCCAAAATGTTGTTGTTCGATTTGTTTGTCAGGGTCATCCTGTAAAAACGATTCCATGGAAAAAATAGAATCAAATCCCAACAAATGCAATATTTCTCCTTGGATCCATATGTGTTATCCTCATAAATGCAGACGCAAAGTCAAGAGTAGCAAAAGTACTACAATTCCATTGGTTTCGAATGAACCACTGCAAGATAGTTCAACCTCATCGGTGTCAAACTTTGATTATCTTCATCTTTGGCAAAGTGCTCAATGTCTTTCGAAGCAACCACAGATCCTGCGCAATGTTAAAGAAATTAAACTACGAAAATTTTCAAAGATCAAATCTGTATTTATCTTGTCTATTGCTCCATTGATGTTGGAAACTTTGATAATTGAGGACTGCGATGAATTACAGCACATAATAATAGACATTGGTGACAGTAATTTGAGTTATATGTTTCCAAAATTGAAAGTGATCAATGTGAAAAGTTGTAGGCAATTGGAATATATATTCGGAAGTTGCGATGATCATCGGAATCATAATCAGATAAATGTTGATCTTCCTCTCTTGGAAAGTATCTGGTTACATGATCTGCCATGTTTAATCGGAATTTGCTCGAAAAACTATAGCACTACATTGTCACCTTTGAGTAACACATCTATTAAGGAGTTGAGTGAGACCAAGCATCTGCTCTCTTTGAGAGATCTCTGGGTAGATGGCTCCAAAATTGAAAATATTTGTTGCTTCAATGAAATAATTGGGCACGAAATCATTCTAGGGTGGGAAAACATTAGGTTGGAAGATCTGCCTCATATGACCTATCTTTTTGTAGGTCCTAAGAATTCTTTTACCCTCCAAAACCTTACGAAGTTAATCATTGTGCAATGTGAGAAATTAGAAGTAATCTTCACTGCTTCTATTTCAAGATGCTTACCACAGTTGCGGATTCTAATTATAAGAGAATGTAAAGAATTAAAGCAGATCATTGAAGAGAATGCAGAAAATCAGGAAATGTCTTTACCAAAGCTAGAAGTGATAGTGGTCGAAAAATGCAACAAATTAACATATCTCTTTCCTGTCTCCACTTCTAAAGAGATTCTTCAGCTAAGACTTCTGATAATAAAAGAAGCCTCTGAGTTAAAGGAAGTATTCAGATGCGAAGCTGATCAAAAAGTTGAGTTTCCACAGCTAAGACTTTTGGTATTTGTAAAACTACCAATCTTCAGCCTCAGCCAGGGGATTGAATTGGAGAATACAATTCTTTGGGTGCAGAGTTGTCCAAATCTCTCTTTGACTTCAACGATAGAGTCCGATCAGTTGAAGCGTACAGTTTTACACTATGCCTACATAGGTTGTTATTCTTGGGAAATAATAAAAGACATTACTCAAGATCTTAAAGACTCAATAATCCAAGATCCTAGCAATGAAAGTCAAACTACAAAAATCACTGAAGACATCGAAGGTGAGCTGGAAGTCCAAGCAACATCCCAAAGTGAGTTGGCTTCTTCAGAAGTCAATACGAATCAATCCATTGCAGAGATAAAGCATGAAATTGTTGAAGAAGATTCGAGTTTAAAGATACCATCGGCAACAACATCACCAATTAAATGGCATGAAGCATATTCAGATGTGTTGTTGGATGAACAATCAACAGGAGAACCATGCTTGATGAACCAAAACCAGGCCATTGGACTAACTGATACCACCTTTAAAATTTCTCAAGGAAATAATTGTCTTAAAGAAATAGAGGACCAAAGTAATCAAGAGGATTTTGTATCAAAGCAAACTATTACAACAACTTTATTCATGGATTCAGAAAAAGGGAACACATCACCCAGACAATTGCTTCCTCCTATACAAGAGGATGTTGAGAGAAATTTTGAAGTAGGAACAACATCAGCCAATGTCGTGATAGTAGCATCGCCTAACTATGGGAGAACATTCTTCAATGAAACACCAATGGAAGAACATTCCTCAATGAAAGAACAACAGCCCCTTGGAGAAACTGATATTGTTTTTGAAGTTCCTCAAGGAAATAATGGCATGCCACTACCTAACTATGTACACGATGCTAAAAAAACTTGA 4929 0.3652 MANIGVDLVKSILDRLMDCVIAESRDVCCFSDIVEDIEKEKKALEESVKEEQSKGNNIRTDVTSCLKETDELIKDTQMKKTCFFGWCPDCKWRYNKAQQLANKMKETERFLKSGNVGISPKLPGVEYHSSQDYVSFESRKSKIEELLDALKNDSNFIIGLQGMGGTGKTTLAKEVGKELKQLQQFDHVIDTTVSYTPDIRKIQDDIAAPIGLDFKDKNESERLKLLWSRLTGAEKILLILDDVWNPISFDEIGIPRKDNHKGCRIVLTTREMKVCQSMGCEKIIQLGVLSEEDAWTLFKMHANISDSSSKRLLDKGRDITKECKGLPVAIAAIASSLKGEQRLEEWKSTLKSLQKSVPMHGVDKSLIEVYKCLRYSYDNLKDEEAKKLFLLCSMFPEDEELSNETLTRFGIGAGFLGEMDCKYDEARNQVVVAMNKLVDSCLLLKGGKQSVKMHDLVRDVALWIANEEIQAVNVSNKNQKFLLERRRNIKYLLCEGKSMDVFSCKFDSSKPEILNVYMHEDEDEDENASVEAPNSFFESMTELRVLHLSFKTWRYVSLSLPQSFQSLTNIRSLILVRLLLRDFSVLKNLQNLETLDLVSCHMDELPREIAKLEKLRLLRLRRGIVKNLNSIKVIERCSSLEELYIVGMNLMFHTSTMHEKITFPALQRYIMSDNRTMGDESLSKCVAFPEIDAIFSEVTFKHLVQTSELLHLLEVKGEWRNLIPDIVPIDRGMNDLIELYLSESPQLRCLVDTTHIDSHRHSFFSKLIELKLHRMENFEELCNGPFPFDFLNNLQRLDIWDCINMRSIVFKSKLNLCYLKTIELYKCPKLVSLFQLSTCQSLLLLEKLSIHDCEKLKNIIADGENDNKSCASMFPNLKTLDISECPQLEYILPTLSTQVVPLLETIITRDCGALKYIFHQYQHEHASHQEAKDIILGSLKEVEFSGLPNLIDIFPKCCCSICLSGSSCKNDSMEKIESNPNKCNISPWIHMCYPHKCRRKVKSSKSTTIPLVSNEPLQDSSTSSVSNFDYLHLWQSAQCLSKQPQILRNVKEIKLRKFSKIKSVFILSIAPLMLETLIIEDCDELQHIIIDIGDSNLSYMFPKLKVINVKSCRQLEYIFGSCDDHRNHNQINVDLPLLESIWLHDLPCLIGICSKNYSTTLSPLSNTSIKELSETKHLLSLRDLWVDGSKIENICCFNEIIGHEIILGWENIRLEDLPHMTYLFVGPKNSFTLQNLTKLIIVQCEKLEVIFTASISRCLPQLRILIIRECKELKQIIEENAENQEMSLPKLEVIVVEKCNKLTYLFPVSTSKEILQLRLLIIKEASELKEVFRCEADQKVEFPQLRLLVFVKLPIFSLSQGIELENTILWVQSCPNLSLTSTIESDQLKRTVLHYAYIGCYSWEIIKDITQDLKDSIIQDPSNESQTTKITEDIEGELEVQATSQSELASSEVNTNQSIAEIKHEIVEEDSSLKIPSATTSPIKWHEAYSDVLLDEQSTGEPCLMNQNQAIGLTDTTFKISQGNNCLKEIEDQSNQEDFVSKQTITTTLFMDSEKGNTSPRQLLPPIQEDVERNFEVGTTSANVVIVASPNYGRTFFNETPMEEHSSMKEQQPLGETDIVFEVPQGNNGMPLPNYVHDAKKT* 1643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1879 1642 Gene3D - 377 462 IPR036388 -
Apr10g1879 1642 PANTHER - 78 958 - -
Apr10g1879 1642 PANTHER - 1190 1354 - -
Apr10g1879 1642 Gene3D Ribonuclease Inhibitor 1126 1378 IPR032675 -
Apr10g1879 1642 Gene3D Ribonuclease Inhibitor 710 984 IPR032675 -
Apr10g1879 1642 PRINTS Disease resistance protein signature 157 172 - -
Apr10g1879 1642 PRINTS Disease resistance protein signature 230 244 - -
Apr10g1879 1642 PRINTS Disease resistance protein signature 323 337 - -
Apr10g1879 1642 PRINTS Disease resistance protein signature 872 888 - -
Apr10g1879 1642 Pfam NB-ARC domain 141 379 IPR002182 GO:0043531
Apr10g1879 1642 Gene3D - 288 376 IPR042197 -
Apr10g1879 1642 MobiDBLite consensus disorder prediction 1622 1642 - -
Apr10g1879 1642 Gene3D Ribonuclease Inhibitor 523 685 IPR032675 -
Apr10g1879 1642 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 392 IPR027417 -
Apr10g1879 1642 CDD AAA 143 269 - -
Apr10g1879 1642 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1190 1354 - -
Apr10g1879 1642 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 78 958 - -
Apr10g1879 1642 SUPERFAMILY L domain-like 1163 1378 - -
Apr10g1879 1642 SUPERFAMILY L domain-like 447 951 - -
Apr10g1879 1642 Gene3D - 123 285 IPR027417 -
Apr10g1879 1642 Coils Coil 34 54 - -
Apr10g1879 1642 Coils Coil 1267 1287 - -
Apr10g1879 1642 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1879 Apr-Chr10 31809312 31817949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1879 158 639 WRKY Transcription Factor Family AT5G45050 25.498 1.26e-16 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1879 - - aprc:113851227 3246.83