Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1877 ATGGCCTGGATATTCTCATGGCAGTACAGGTATAGCAAGACAGAAGAAGATGATATTCTTCCCATGATTCACAGACATGCTTTTGTGAAATGGTGGAACCAATTCAATGCAAAACATGCAGGGCCACAAGGAGTTAATGAATTTTTTGGAAATAATCCAAAACTCTTGAGGCTCGCTGATCCAGTTACTTTCAAATTTCTAAATCAGAAAGCAAAGATTGCCGCCTTCCTATCAGGATGTGATTCTAAAGATAAAATGAAGAAAAACTTAAAAGAAGTTCTTCTACTTCTGAATCAAGATGAGGCTGAATCTTCTACCAAACAAAAGTCTGATCCTAACAAAGATGATGACTTTTATCAAAATGAAGATGATTATCTCACTTCTTGGCTAAAAGAAACTGACGAACTTATTAACGACACTCAGATGAAAAAGACGTGCTTTTATGGATGGTGTCCAAATTGCAAATGGAGATATAGTAGGGGAAAACAACTGGCAAATAAGAAGGAGTTGAAAAGTGGCAATGTTGGAATTTCCCCTAAACTTCCAGGTGTTGAGTATCATTCTTCTCAAGATTACGTTTCTTTTGAGAGCAGAAAATCGAAAATCGAAGAACTTCTGGATGCGCTGGAAAATGACAGCAATTTTATAATTGGATTGCAAGGGATGGGGGGAACAGGTAAAACTACGTTGGCAAAAGAAGTGGGTAAGAAACTTAAGCAGTTAGAACAATTTGATCATGTCATTGATACTACGGTGTCATATACTCTTGATATAAGAAAGACTCAAGATGACATTGCTGCACCCTTAGGATTGGACTTCAAAGATAAAAATGAATCAGAGAGACTCAAGCTTCTTTGGAGTAGATTAACCGGTGGTGCAAAAATTCTTTTGATATTGGATGATGTGTGGAATCCTATCAATTTTGATGAAATTGGGATTCCAAGGAAAGACAATCACAAGGGTTGTAGAATCTTTTTAACCACACGTGAAATGAAGGTTTGCCAATCAATGGGATGGGAAAAGATAATTCAATTGGGGTTTTGTTCCGGGGAAGATGCATGGACCTTGTTCAAAAAGCATGCTCATATAAGTGATTGTTTCTCTAAACGTTTGTTGGCCAAAGAATGCGAAGGGTTACCCGTTGCAATAGCAGCCATTGCTAGCAGTTTAAAAGGTGAACAACGCTTGGAGAAATGGAAATCAACTTTAAAATCCTTGCAGAAGTCTGTGCCTATGCATGGTGTTGATGAAAGTTTGATTGAAGTTTATAAATGTTTGAGGTATACTTATGATAATTTGAGGAATGAAGAAGCCAAGAAACTATTCCTCTTATGTTCACTGTTTCCAGAAGATGCAGAACTTTGA 1365 0.3722 MAWIFSWQYRYSKTEEDDILPMIHRHAFVKWWNQFNAKHAGPQGVNEFFGNNPKLLRLADPVTFKFLNQKAKIAAFLSGCDSKDKMKKNLKEVLLLLNQDEAESSTKQKSDPNKDDDFYQNEDDYLTSWLKETDELINDTQMKKTCFYGWCPNCKWRYSRGKQLANKKELKSGNVGISPKLPGVEYHSSQDYVSFESRKSKIEELLDALENDSNFIIGLQGMGGTGKTTLAKEVGKKLKQLEQFDHVIDTTVSYTLDIRKTQDDIAAPLGLDFKDKNESERLKLLWSRLTGGAKILLILDDVWNPINFDEIGIPRKDNHKGCRIFLTTREMKVCQSMGWEKIIQLGFCSGEDAWTLFKKHAHISDCFSKRLLAKECEGLPVAIAAIASSLKGEQRLEKWKSTLKSLQKSVPMHGVDESLIEVYKCLRYTYDNLRNEEAKKLFLLCSLFPEDAEL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1877 454 Pfam NB-ARC domain 200 432 IPR002182 GO:0043531
Apr10g1877 454 Coils Coil 83 103 - -
Apr10g1877 454 Coils Coil 192 212 - -
Apr10g1877 454 PRINTS Disease resistance protein signature 216 231 - -
Apr10g1877 454 PRINTS Disease resistance protein signature 289 303 - -
Apr10g1877 454 PRINTS Disease resistance protein signature 376 390 - -
Apr10g1877 454 PANTHER DISEASE RESISTANCE PROTEIN RP 130 453 IPR044974 GO:0006952
Apr10g1877 454 PANTHER DISEASE RESISTANCE PROTEIN RFL1-RELATED 130 453 - -
Apr10g1877 454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 445 IPR027417 -
Apr10g1877 454 Gene3D - 181 343 IPR027417 -
Apr10g1877 454 Gene3D - 349 434 IPR042197 -
Apr10g1877 454 CDD AAA 202 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1877 Apr-Chr10 31758633 31766609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1877 217 448 WRKY Transcription Factor Family AT5G45050 25.000 1.82e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1877 - - aprc:113851225 927.546