Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1874 ATGGGATGCGAAAAGATAATTCAATTGGGGGTTTTATCCGAGGAAGATGCATGGACCTTGTTCAAAAAGCATGCTCATATAAGTGATAGTTCCTTGAAACATTTGTTGGATAAGGGACGCGATATTACCAAAGAATGTAAAGGGTTACCAGTTGCAATAGCAGCCATTGCTAGCAGTTTAAAAGGTGAAGGAAATGTGAAAGTGTGGAAATCAACTTTAAGATCCTTGCAGAAGTCCGTGCCTATGCATGGTGTTCCTAAAAGTTTGATTGAAGTTTATAAATGTTTGAGGTATAGTTATGATAATTTGAAGGATAAAGAATCCCAGAAACTATTCCTCTTATGTTCTATGTTTCCAGAAGATGAAGAACTTTCCAATGAAACTTTAACCAGATTTGGCATTGGAGTGCGCCTTTTTGGGGAAATGGATGGCAAATACGATGAAGCTCGAGACCAAGTCGTTGTTGCCATTCATAAACTTGTAGATTCTTGTTTGTTGTTGAAGTGTGGGAAAGAAAGTGTGAAAATGCATGACTTGGTTCGTGAAGTGGCCTTATGGATAGCTAATGAGGAAATTCAAGCAGTAAATGTGTGTAACAAAAATCAGAGGTTATTGCTTGAGAGGAGGAAGAATATTAAATATTTGTTATGCGAAAGGAAGAAGATGGATGTATTTTCTTGTAAGTTTGATAGCTCCAAACTTGAGATTCTAAAAGTCGTCTACATGCATGAAGATGAAGATGAAAATGCTTCTGTAGAAGTCCCAAATTCATTCTTTGCAAATATGACGGAACTTCGAGTTTTGCATTTGTCATTGAAGACACGGAGATATGTTTCTCTATCATTACCACAGTCATTCCAATCATTGACAAATATTCGGTCTCTAATCCTTGAAAGGTTACGCTTAGAAGACTTCTCTGTTCTGAAAAACATACAAAATCTTGAGACTCTTGATTTGGTTCGGTGCCGTATGGATGAATTACCCCGTGAAATTGCAAAACTGGAGAAATTTAGAGTGTTGAGGTTAAGAGGTGGCATTGTTGGAAATTTTAATTCAATTAAAGTGATTGAAAAGTGCTCATTACTTGAAGAATTGTACATTGTTGGTACGGATCTCACGTTTGATACTTCGGCAATGCATGAGAAAATAACCTTTCCTGCATTGCAAAGGTACATTATGAGTGAATATCTGGTGGATGAATCGTTGTCAACATGTGTGGCCTTTCCGAAGATTGATGCTATTTTCTCAGAAGTGACATTCAATCATTTGGTGCAAACAACCGAACTTCTTCATCTGGGAAAAATCGAGGGGGAATGGAGAAATCTCATACCTGATATTGTTCCCATGGATAGAGGTATGAATGACCTAATCGAGCTTTATTTATGGGAGAGTCCACAATTGCGGTGTCTCATTGACACTACACGTATTGATTCTCATAGACGAAGTTTCTTCTCCAAGTTGATTGAGCTACGACTTAGAGCCATGGACAATTTCGAAGAACTATGCAATGGTCGCTTTCCCTTTGACTTTCTAAACAATTTACAGAGTCTAGATATCTCAGATTGTATAAATTTGAGAAGCATATTGTTTAAGAGCAAGCTAAACCTCTGCTATCTTAAGACCATTGAATTGTACAATTGCCCAAAATTGGTATCCCTATTTCAATTGTCAACTTGTCAAAGGCTCTTGCTTTTGGAGAAACTGTCCATACATGATTGTGAGAAACTAAAAAACATAATAGCAGATGAAAGAGTAAATGAAGATAGAAGGGAAGAGATTGTTGATGGTGAGAATGATAACAAGAGTTGTGCCTCAATGTTTCCAAATCTGAAAACTCTTTATATTATCGAGTGTCCCCAATTGGAATATATACTTCCAACTCTTTCTACTCAAGTTGTTCCATTGCTAGAAACTATCATAACACGTGATTGTGGTGCGCTGAAATACATATTTCATCAATACCAACATGAACATGCAAGGTCATCCTGTAAAAACGATTCCATGGAAAAAGTAGAATCAAATCGCAAGAAATGCAATATTTCTCCTTGGATCCATATGTGTTATCCTCATAAATGCAGACGCAAAGTCAAGAGTACCAAAAGTACTACCAATGAACCATTGCAAGATTGTTCAATCTCATCGGTGTCAAACTTTGACTATCTTCATCTTTGGCAACGTGCTCAATGTCTTTCGGAGCAACCACAGATCCTGCGCAAAATTAAAGAAATTGACCTACAAAATTTTTCAAAGATCAAATCTGTATTTATCTTCTCCATTGCTCCAGTGATGTTGGAAACTCTGAGAATTCAGGACTGCGACGAATTACAGCACATAATAGTAGACATTACAGATGACCTTGGTGACAGTGATTTGATTTATGGTTTTCCAAAATTGAAAGAGATCTATGTGAAAGGTTGTAGGCAATTGGAATATATATTCGGATGTTGGGTTGATGATCATCAGAATCATAATAAAAGAAACCTTGATCTTCACGTCTTGGAAAGTCTCCGCTTACATGATCTGCCAAGTTTAATAGGCATTTGCTCCAAAAACTATAGCACAACATTGCCACCTTTGAAGAAGTTTGAACACAACGGATGTTCCCATATTAGCATTAAATCTATTGGCGATTTCACCCTTTCTTTGAGTAACACATCTGTTAAGGAGTTGAGTGGGAACGTGAAGCATCTTCTCTCTTTGAAAAATCTCTGTTTCCATGGCCCCAAAATTGAAAACATTTGTTGTTTCAATGAAATAATTGGACAAGAAACAAATTTAGGGTGGGAAAACATTCGGTTGGAAGATCAGCCTCGTGTGACCTATCTTTTTGAAGGTCCTAAGAATTCTTTTATCCTCCAAAACCTTATGGACCTAATTATTGTGCAATGTGAGAAATTAGAAGTAATCTTCACTGCTTCTATTTCAAGATGCTTACCACAGTTGCGGATTCTAATTATAAGAGAATGTAAAGAATTAAAGCAGATCATTGAAGAGAATGCAGAAAATCAGGAAATGTCTTTCCCAAAGCTAGGAGAGATAGTGGTCGAAAAATGCAACAAATTAACATATCTCTTTCCTTTCTCCACTTCTAAAGAGCTTCCATGGCTTCAAGTTCTGATAATAAAAGAAGCGTCTGAGTTAAAGGAAGTATTCAGAGCTGATCAAAAAGTTGAGTTTCCACAGCTAAGACTTTTAGTATTTGTAAAACTAATAATCTTCAGCCTCAGCCAGGGGATTGAATTGGAGAATACACATCTTTGGGTGCAGAGTTGTCCAAATCTCTCTTTGACTTCAACGATAGAGTCCGATCAGTTGGAGAACACAGTTTTTCGCTATGTCTACGGAGGTTGTTATTCTTGGGAAATAATAAAAGGCATTGCTCAAGATCTTAAAGACTCAATAATCCAAGATCCTAGCAATGAAAGTCAAACTACAAAAATCACTGAAGACATCGAAGGTGAGCTGGAAGTCCAAGCAACTTCACAAAGTGAGTTGGCTTCTTCAGAAGTCAATACGAATCAATCCATTGCAGAGATAAAGCATGAAATTGTTGATGAAGATTCAAGTTTAAAGATACCATCGGCAACAACATCACCAATTAAATGGCATGAAGCACATTCAGATGTGTTGTTGGATGAACAATCAACAGGAGAACCATGCTTGATGAACCAAAACCAGGCCATTGGACTAACTGATACCACCTTTAAAATTTCTCAAGGAAATAATTGTCTTAAAGAAATAGAGGACCAAAGTAATCAAGAGGATTTTGTATCAAAGCAAACTATTACAACAACTTTATTCATGGATTCAGAAAAAGGGCACACATCACCCAGACAATTGCTTCCTCCTATACAAGAGGGTGTTGAGAGAAATTTTGAAGTAGGAACAACATCAGCCAATGCCATGATAGTAGCATCGCCTAACTATGGGAGAACATTCTTCAATGAAACACCAATGGAAGAACATTCTTCAATGAAAGAACAACAGCCCCTTGGAGAAACTGATATTGGTTTTGAAGTTCCTCAAGGAAATAATGGAATGCCACCACCTAACTATTGTTTGAAAGACAGAGAGAACCAAAGTACTCAAGAAGGTTCTATGTCAGGGAAAAATATAACAGCAACTCTACTGATGAAGTCAGAAATAAGGAACACATCACTAGGACCATTACTATCTCCTTTACAAAAAGTATTTTACTGTTTATATTCAATATAA 4215 0.3689 MGCEKIIQLGVLSEEDAWTLFKKHAHISDSSLKHLLDKGRDITKECKGLPVAIAAIASSLKGEGNVKVWKSTLRSLQKSVPMHGVPKSLIEVYKCLRYSYDNLKDKESQKLFLLCSMFPEDEELSNETLTRFGIGVRLFGEMDGKYDEARDQVVVAIHKLVDSCLLLKCGKESVKMHDLVREVALWIANEEIQAVNVCNKNQRLLLERRKNIKYLLCERKKMDVFSCKFDSSKLEILKVVYMHEDEDENASVEVPNSFFANMTELRVLHLSLKTRRYVSLSLPQSFQSLTNIRSLILERLRLEDFSVLKNIQNLETLDLVRCRMDELPREIAKLEKFRVLRLRGGIVGNFNSIKVIEKCSLLEELYIVGTDLTFDTSAMHEKITFPALQRYIMSEYLVDESLSTCVAFPKIDAIFSEVTFNHLVQTTELLHLGKIEGEWRNLIPDIVPMDRGMNDLIELYLWESPQLRCLIDTTRIDSHRRSFFSKLIELRLRAMDNFEELCNGRFPFDFLNNLQSLDISDCINLRSILFKSKLNLCYLKTIELYNCPKLVSLFQLSTCQRLLLLEKLSIHDCEKLKNIIADERVNEDRREEIVDGENDNKSCASMFPNLKTLYIIECPQLEYILPTLSTQVVPLLETIITRDCGALKYIFHQYQHEHARSSCKNDSMEKVESNRKKCNISPWIHMCYPHKCRRKVKSTKSTTNEPLQDCSISSVSNFDYLHLWQRAQCLSEQPQILRKIKEIDLQNFSKIKSVFIFSIAPVMLETLRIQDCDELQHIIVDITDDLGDSDLIYGFPKLKEIYVKGCRQLEYIFGCWVDDHQNHNKRNLDLHVLESLRLHDLPSLIGICSKNYSTTLPPLKKFEHNGCSHISIKSIGDFTLSLSNTSVKELSGNVKHLLSLKNLCFHGPKIENICCFNEIIGQETNLGWENIRLEDQPRVTYLFEGPKNSFILQNLMDLIIVQCEKLEVIFTASISRCLPQLRILIIRECKELKQIIEENAENQEMSFPKLGEIVVEKCNKLTYLFPFSTSKELPWLQVLIIKEASELKEVFRADQKVEFPQLRLLVFVKLIIFSLSQGIELENTHLWVQSCPNLSLTSTIESDQLENTVFRYVYGGCYSWEIIKGIAQDLKDSIIQDPSNESQTTKITEDIEGELEVQATSQSELASSEVNTNQSIAEIKHEIVDEDSSLKIPSATTSPIKWHEAHSDVLLDEQSTGEPCLMNQNQAIGLTDTTFKISQGNNCLKEIEDQSNQEDFVSKQTITTTLFMDSEKGHTSPRQLLPPIQEGVERNFEVGTTSANAMIVASPNYGRTFFNETPMEEHSSMKEQQPLGETDIGFEVPQGNNGMPPPNYCLKDRENQSTQEGSMSGKNITATLLMKSEIRNTSLGPLLSPLQKVFYCLYSI* 1405
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1874 1404 Coils Coil 986 1006 - -
Apr10g1874 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 115 IPR027417 -
Apr10g1874 1404 Gene3D - 11 99 IPR042197 -
Apr10g1874 1404 Pfam NB-ARC domain 4 102 IPR002182 GO:0043531
Apr10g1874 1404 SUPERFAMILY L domain-like 210 624 - -
Apr10g1874 1404 PANTHER - 1004 1078 - -
Apr10g1874 1404 PANTHER - 952 1010 - -
Apr10g1874 1404 PANTHER - 59 630 - -
Apr10g1874 1404 Gene3D Ribonuclease Inhibitor 194 656 IPR032675 -
Apr10g1874 1404 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 59 630 - -
Apr10g1874 1404 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1004 1078 - -
Apr10g1874 1404 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 952 1010 - -
Apr10g1874 1404 Gene3D - 100 185 IPR036388 -
Apr10g1874 1404 SUPERFAMILY RNI-like 737 1050 - -
Apr10g1874 1404 Gene3D Ribonuclease Inhibitor 737 1096 IPR032675 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr10g1874 Apr-Chr10 31714383 31721965 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1874 5 582 WRKY Transcription Factor Family AT5G45050 23.539 1.87e-06 50.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1874 - - aprc:113851221 2805.01