Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1872 ATGGGTAATAACAGGTTCAAATTGTCAAATATGATACCAAATGCATGGTTCTACAAGCTCAGAGATATGAGCAAATCAAGGAAGCACAATGGCTCTCATGTTATGAAGAACAAAGTGACCTCACCAACAACATCCCAAAGGTCTCAGCCAAGATACTCTAATTATTTCTCCATTGAAACAAACAAGGATGGTAAGTTATTATACAACTCTCCCATTTACACTAAACACTCAGACAACATATTCATTGATTCACCAAGAATGTCATCCAAGAGAAGGACTAAGAGAAAAACCATTTATAAGCCTTCTCCAACACTTGACCAAACTCAGTCTCATGACTATTATTTCTCCTCCTTAGACACTTCTTCTGAATCAAACCTTCATGAATATGTTTCATCTGAGTCTGAGTGTGATAAGTTCACTGTTCCTGACTTGCTTAATGGGCTAGCCTCTGAATGCAGTTGTAGAGTTAGCTCTTCCACTAATGACATCATCATTGACATGAAAAATGAGCCCTTCATTGGAACTTCTGAAAATCTTGATGGGTTTCAGACAATTTCACAGTTAGGCCTTGCTCCAATATTGACAAAACCAGTTAGGCTTGATGATAAGATCATTGAAGCCACTGAGTTGAGAAGATCAAATAAATTTGATGAGCTAAAGACTCATCAATCTCTATCCGTCAAAATTAGAAAAGAGGAAATGAATAGAACCAAGAAAGAGAGAAAAACCAGTCCACTAGCTAGAATTTCCTCTGCTAATTCTACAGGTATAAGACTAAGAGTCAATTCTCCAAAACTTGCGAGCAAGAAGGTTCAAGCCTATGCAAGAAAGAGTGTGTCATCCAAAGCATGCAAAGCCTCAACGAATGCAGGTTTTCCAGATGGATTTGCAGTTGTTAAGTCCTCATTTGATCCACAAAGAGACTTTAGAGAATCTATGATGGAGATGATTGTGGAGAACAATATCCGGGCATCAAGGGATTTGGAGAACTTACTTGCATGCTATCTTTCACTGAATTCTAGAGAATACCATGATCTCATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGGCTCAAATCAGAATGTGA 1092 0.3791 MGNNRFKLSNMIPNAWFYKLRDMSKSRKHNGSHVMKNKVTSPTTSQRSQPRYSNYFSIETNKDGKLLYNSPIYTKHSDNIFIDSPRMSSKRRTKRKTIYKPSPTLDQTQSHDYYFSSLDTSSESNLHEYVSSESECDKFTVPDLLNGLASECSCRVSSSTNDIIIDMKNEPFIGTSENLDGFQTISQLGLAPILTKPVRLDDKIIEATELRRSNKFDELKTHQSLSVKIRKEEMNRTKKERKTSPLARISSANSTGIRLRVNSPKLASKKVQAYARKSVSSKACKASTNAGFPDGFAVVKSSFDPQRDFRESMMEMIVENNIRASRDLENLLACYLSLNSREYHDLIVKAFEQIWYDMAQIRM* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1872 363 MobiDBLite consensus disorder prediction 27 50 - -
Apr10g1872 363 Pfam DNA-binding domain 1 47 IPR025830 GO:0003677
Apr10g1872 363 Pfam Transcriptional repressor, ovate 302 358 IPR006458 -
Apr10g1872 363 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 362 - -
Apr10g1872 363 MobiDBLite consensus disorder prediction 35 50 - -
Apr10g1872 363 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 296 358 IPR006458 -
Apr10g1872 363 ProSiteProfiles OVATE domain profile. 298 357 IPR006458 -
Apr10g1872 363 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 362 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1872 Apr-Chr10 31700237 31701471 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Apr10g1872 Ovate 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1872 - - gmx:100798120 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1872 10 31700237 31701471 Apr9g1217 9 21711128 21714522 PCT