Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1869 ATGCCGGAGATCGAACAAATGGCGGAGGAAACCGCCCTGTTCGGAAAATACGAACTCGGCAGAGTCCTCGGTTGCGGTGCATTCGCGAAGGTGTACTACGCGCGCAACGTGCAAACGGGTCAGAGCGTGGCGGTGAAGATCATCAACAAGAAGAAACTCACCGGAACAGGCCTCGCCGGAAATGTGAAACGCGAAATCAGCATCATGAGTCGTCTCCACCACCCTCACATCGTGGGCCTCCACGAGGTCCTCGCAACGAAGACCAAGATCTACTTCATCATGGACTTCGTTCGCGGTGGCGAACTCTTCGCGAAAATCTCAAAGGGTCGATTCGCGGAGGACCTGAGTCGCCGGTATTTTCACCAGTTAATCTCTGCCGTCGGGTACTGCCACTCACGCGGCATTTTCCACCGTGATCTCAAGCCGGAGAATCTTCTCCTCGACGAGAATGGTGATTTGAAAGTGTCGGATTTCGGCTTAAGTGCGGTTAGGGATCAGATCCGACCCGATGGTTTGCTCCATACACTTTGTGGAACACCCGCTTACGTGGCACCTGAGATTTTAGCGAAGAAAGGATATGATGGAGCCAAGGTTGATGTTTGGTCATGCGGTGTCGTTTTGTTTGTTCTTGCTGCGGGTTATTTACCCTTTAATGACCCGAATTTGATGGTTATGTACCGGAAAATTTATAAGGGTGAATTCCGGTGTCCACGGTGGATGTCGCCGGAGCTCCGGCGGTTTTTGTCTAAGTTGCTTGATACTAACCCGGAAACCCGGATTACAGTTGATGGGATGACCCGGGACCCGTGGTTTAAGAAGGGGTATAAGGAGATTAAGTTTCATGAGGAGGATCATGGGTCTGGATCCGGGTCGGGTTTCGGGTCTGGGCCGAAGAGGGTGATGGAGTTGAATGCGTTTGATATTATATCTTTTTCGTCGGGTTTGGATTTGTCCGGGTTGTTCGGGCAATCGGGTGGGGAAGAATGGGTGGTGTCTCGGGAGTTGCCGGAGAAGATTGTGGAGGCGGCGGAGGAGGTGGGGACGGCGGCGGGGATGGCGTTGAGGTGGAAGAAGGAATGCGGGGTGGAGTTGGAAGGGATGAATGGGAATTTTGGAATTGGGATTGAAGTTTACCGGTTAACGGCAGAGCTGGCGGTGGTTGAGGTTAGAAAGTGGGGCGGCGACGCCGTGGCTTTTGCGAACGTATGGGACAACAAGCTTAAGCCTTTGTTAATGGGGGATGCAACGACTTCGAATAGTAACCAAGAATCACCGGAGTAG 1281 0.5262 MPEIEQMAEETALFGKYELGRVLGCGAFAKVYYARNVQTGQSVAVKIINKKKLTGTGLAGNVKREISIMSRLHHPHIVGLHEVLATKTKIYFIMDFVRGGELFAKISKGRFAEDLSRRYFHQLISAVGYCHSRGIFHRDLKPENLLLDENGDLKVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPNLMVMYRKIYKGEFRCPRWMSPELRRFLSKLLDTNPETRITVDGMTRDPWFKKGYKEIKFHEEDHGSGSGSGFGSGPKRVMELNAFDIISFSSGLDLSGLFGQSGGEEWVVSRELPEKIVEAAEEVGTAAGMALRWKKECGVELEGMNGNFGIGIEVYRLTAELAVVEVRKWGGDAVAFANVWDNKLKPLLMGDATTSNSNQESPE* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1869 426 Gene3D Kinase associated domain 1, KA1 299 413 - -
Apr10g1869 426 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1869 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Apr10g1869 426 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1869 426 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 423 - -
Apr10g1869 426 PANTHER - 1 423 - -
Apr10g1869 426 CDD CIPK_C 304 411 - -
Apr10g1869 426 SUPERFAMILY Protein kinase-like (PK-like) 14 279 IPR011009 -
Apr10g1869 426 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Apr10g1869 426 Gene3D Transferase(Phosphotransferase) domain 1 7 289 - -
Apr10g1869 426 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Apr10g1869 426 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1869 426 Pfam NAF domain 302 354 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1869 Apr-Chr10 31677098 31678828 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1869 1 420 CBL-interacting serine-threonine protein kinases AT2G30360 63.678 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr10g1869 Pkinase 1.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1869 - K12761 gmx:100799169 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1869 10 31677098 31678828 Apr9g1213 9 21680671 21682465 PCT