Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1865 ATGGAGAGTAACTCAAATGTCTTAATGCAAAGATATGAGTTGGGAAGATTGTTAGGCCAAGGAACCTTTGGAAAGGTTTACTATGCACGGAGTGCAATAACTAACCAGAGTGTGGCTATTAAAGTGATTGACAAAGATAAGATTATGAGAACTGGGCAAGCTGCACAAATCATGCGCGAAATATCCGTTATGAGAGTGGCCAGACATCCCAATATTATACAGCTTTTTGAGGTTATGGCTAACAAGAAAAAGATTTACTTTGTTATGGAATATGCTAAAGGTGGTGAGCTCTTCAACAAGGTGGCGAAAGGAAAACTCAAAGAAGAAGTTGCACACAAATATTTTAAGCAGCTAATCAATGCTGTAGATTTTTGTCACAGTAGAGGCGTGTACCACCGAGATATAAAGCCTGAGAACATTCTATTGGATGACAACGGGAATCTAAAAGTATCTGATTTCGGTTTAAGTGCTCTTGCCGATTCCAAGCGACAAGATGGCTTACTCCATACACCTTGTGGTACTCCTGCTTATGTTGCTCCTGAGGTCATCAAAAGAAAAGGATATGACGGTGTCAAAGCTGATATTTGGTCTTGTGGGATAGTTCTATTTGTCTTGTTGGCAGGTTATCTCCCTTTTCATGATCCAAATTTGATAGAGATGTATAGGAAGATAAACAAAGCAGAATTGAAGTGTCCTAATTGGTTCCCTGCCGAAGTATGCCAGCTATTGAGTAAGATGTTGGATCCAAATCCTGACAACAGGATTTCCATATCTAATATTAGGGAATATTGTTGGTTTAACAAAGGACCAAATGTTAAAAGTAAAAGACCTGAAGTGGAAAACAACACTGTCTCTTCTTCAGGTACAATTGTTCCTGATCAAAATGATGAAGGTGAAGCAAAGGAAGAATCTGTTGTTCCAGTTAGTATAAATGCCTTTGATATCATCTCACTTTCTGCTGGTTTTGATCTTTCTAGATTCTTTGATGATCATATTCAGAAAAGGGAAGCAAGATTTAGTTCAAGGTTACCTGCATCAATCATCATCTCTAAGCTGGAAGATATTGCTAAGCAACTAAAGCTGAAAATAAGGAAAAAGGTTGCTGGTTTGTTGAAATTAGAGAGACTCAATGAAGGTAGGAAAGGGGTATTATCCATTGATGCAGAGATCTTTGAGGTTACCCCTTTCTTCCATTTGGTTGAGGTGAAAAAATCAAATGGAGACACTTTGGAATATCAGAAAATATTGAACGAAGATATAAGGCCGGCACTTCAGGACATAGTTTGGGTCTGGCAAAGTGATCAACAACTTCAATCACAGCAGTCAGAGCAACAGCTACAGATAGATGATCAGCAGGAACAACAACAATCACAGTCATAA 1380 0.3848 MESNSNVLMQRYELGRLLGQGTFGKVYYARSAITNQSVAIKVIDKDKIMRTGQAAQIMREISVMRVARHPNIIQLFEVMANKKKIYFVMEYAKGGELFNKVAKGKLKEEVAHKYFKQLINAVDFCHSRGVYHRDIKPENILLDDNGNLKVSDFGLSALADSKRQDGLLHTPCGTPAYVAPEVIKRKGYDGVKADIWSCGIVLFVLLAGYLPFHDPNLIEMYRKINKAELKCPNWFPAEVCQLLSKMLDPNPDNRISISNIREYCWFNKGPNVKSKRPEVENNTVSSSGTIVPDQNDEGEAKEESVVPVSINAFDIISLSAGFDLSRFFDDHIQKREARFSSRLPASIIISKLEDIAKQLKLKIRKKVAGLLKLERLNEGRKGVLSIDAEIFEVTPFFHLVEVKKSNGDTLEYQKILNEDIRPALQDIVWVWQSDQQLQSQQSEQQLQIDDQQEQQQSQS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1865 459 Gene3D Transferase(Phosphotransferase) domain 1 92 287 - -
Apr10g1865 459 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 448 - -
Apr10g1865 459 PANTHER - 2 448 - -
Apr10g1865 459 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1865 459 MobiDBLite consensus disorder prediction 276 293 - -
Apr10g1865 459 Pfam NAF domain 307 365 IPR004041 GO:0007165
Apr10g1865 459 Gene3D Kinase associated domain 1, KA1 305 430 - -
Apr10g1865 459 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Apr10g1865 459 CDD CIPK_C 311 425 - -
Apr10g1865 459 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Apr10g1865 459 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1865 459 MobiDBLite consensus disorder prediction 276 299 - -
Apr10g1865 459 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1865 459 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Apr10g1865 459 SUPERFAMILY Protein kinase-like (PK-like) 8 312 IPR011009 -
Apr10g1865 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1865 Apr-Chr10 31658571 31663109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1865 1 435 CBL-interacting serine-threonine protein kinases AT5G58380 67.478 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr10g1865 Pkinase 4.8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1865 - K07198 gmx:100790905 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1865 10 31658571 31663109 Apr9g1212 9 21670363 21673301 PCT