Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1860 ATGGCTTTCAACTCACGTTATGACATATTTTGCTTCTCTATTTTGTTTCCCCTTTTTGCTATAGCTTCTGCTCAGCTATCTTCAGATTTCTATGGAACAACATGCCCCAAAGCCCTCTCTACCATAAAATCTGCTGTGCTGAGTGCAGTTAACAAAGAGCATCGCATGGGCGCGTCCTTGCTCCGTCTTCATTTCCACGATTGCTTCGTTAATGGATGTGATGCATCAGTTCTATTAGATGACACATCGAGCTTCACCGGAGAGAAGTCAGCTGGTGCAAATGTGAATTCTCTGAGAGGTTTTGAAGTGATTGACGACATCAAAAGTCAGTTAGAGACTGCTTGTCCTGGAATTGTTTCTTGTGCAGATATTGTTGCTGTTGCTGCTCGTGATTCTGTTGTAGCATTGGGTGGTCCATCGTGGACTGTTGGGTTAGGCAGAAGAGATTCAACAACTGCAAGTAAAGATGCTGCCACTAAGGATATCCCATCCCCATTAATGGATCTCAGTGATCTCATATCTGCCTTTTCAAATAAGGGGTTTACCACCAAAGAGATGGTAGTCCTCTCAGGAGCACATACAACAGGGCAAGCCAAATGCCAATTCTTCAGAGGCCGCATTTACAATGAAAGCAACATTGATTCAGATTTTGCAACGTCAGTGAAATCAAATTGTCCAAGCACTGATGGTGACAGCAACCTCTCCCCTCTTGATGTCACAACCAATGTGTTATTTGACAATGCTTATTTCAAGAATCTAGTAAACAAAAAAGGGCTTCTACATTCTGATCAGCAACTTTTTAGTGGTGGTTCTACAGATTCTCAAGTCAGTACCTATAGCACCAGCCCTTCAACTTTCTATGCTGACTTTGCTAGTGCCATGGTCAAAATGGGAAACCTTAGTCCTTTAACAGGGAACAATGGTCAAATTCGTACTAACTGCCACAAAGTTAATTGA 957 0.4242 MAFNSRYDIFCFSILFPLFAIASAQLSSDFYGTTCPKALSTIKSAVLSAVNKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAGANVNSLRGFEVIDDIKSQLETACPGIVSCADIVAVAARDSVVALGGPSWTVGLGRRDSTTASKDAATKDIPSPLMDLSDLISAFSNKGFTTKEMVVLSGAHTTGQAKCQFFRGRIYNESNIDSDFATSVKSNCPSTDGDSNLSPLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVSTYSTSPSTFYADFASAMVKMGNLSPLTGNNGQIRTNCHKVN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1860 318 Pfam Peroxidase 44 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 CDD secretory_peroxidase 25 317 IPR033905 GO:0004601|GO:0042744
Apr10g1860 318 PANTHER PEROXIDASE 72-RELATED 18 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 Gene3D Peroxidase, domain 2 163 297 - -
Apr10g1860 318 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 ProSiteProfiles Plant heme peroxidase family profile. 25 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PANTHER PEROXIDASE 18 318 - -
Apr10g1860 318 Gene3D - 29 314 - -
Apr10g1860 318 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g1860 318 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1860 Apr-Chr10 31603720 31605674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1860 21 318 Peroxidase AT5G05340 63.333 4.71e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1860 K00430 - gmx:100818176 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1860 10 31603720 31605674 Apr9g1201 9 21563889 21566539 PCT