Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1858 ATGGTTTCCAGGGTTCACAAGAGAACAGCCATGTACAGGAACCTACAACTGCTTCGTTCAATCACATACTCCCACTCGCGCCGTAAAGCCACAGTGTTATTGGATGCGTTAGAATACATGCAAGATTTAAAGCAAAAGCTGCAAGAATTGAACCAGTTAACAGTGGCAACAGCACGGGAAATCGTTGACTATGATCCAATGCCTAAGCTTAAAGTTGAAACGCAAGAAGGGGGCTTTGTAATCAAGGTGCTGAGTCAAACAAGTTGTCAGGGGTTACTGGTGTTCATATTGGAAGCCTTTGAAGAGCTGGGCCTTGGGGTGCTCCAAGCTAGGGTTTCTTGTGTGGACAACTTCAGTTTAGAAGCTGTTGGAAACAAAGAGAACAATGAAGATACTCGCCCTTTGGATGCACAATTAATTGAACAAGTAGTGTCTCAAGCTATTCAAAACTGGAGGGAAGTTTCACAGATATAG 474 0.4367 MVSRVHKRTAMYRNLQLLRSITYSHSRRKATVLLDALEYMQDLKQKLQELNQLTVATAREIVDYDPMPKLKVETQEGGFVIKVLSQTSCQGLLVFILEAFEELGLGVLQARVSCVDNFSLEAVGNKENNEDTRPLDAQLIEQVVSQAIQNWREVSQI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1858 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 155 - -
Apr10g1858 157 PANTHER TRANSCRIPTION FACTOR BHLH93-LIKE PROTEIN 1 155 - -
Apr10g1858 157 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1858 Apr-Chr10 31590621 31592150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1858 15 122 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.412 6.30e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1858 - - gmx:100305696 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1858 10 31590621 31592150 Apr9g1197 9 21502570 21507751 PCT