Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1857 ATGCCTTCTACCACTCTTCAATGGCTAAGCCTTGTGGCCATTATTTGGCTCCAAGCCATAAATGGAACAAACACCAATTTCCCCGCTTATTCTTCTCAGCTAAAGCAGCTTCTTTCCATCTCCCAAATGCAGCTCAATAACCTTGCTTTTGCCTCTGATGCAGGGAAGCTTTTTGGTTGGTTTTCTGGCCTTGCTTCTGTTTACCTTCCCCTTTGGCTAGTCCTCATGATTGGTTCAACTCTTGGGCTAATTGGTTATGGTGTGCAATATCTCTTCATAACCAACCAAATTTCCTCTTTGTCATACTGGCATGTCTTCTTACTAACTTTTCTTGCTGGCAATAGCATTTGTTGGATTAACACAGTTTGCTATGTTGTCACCATAAGAAACTTTCTACCTGATCGCCAAGTTGCAGTGGGAATAACCACCAGTTATCAAGGGCTAAGTGCAAAGATTTATACCAACATTGTTGATGCTGTTTCTCCTCACAAGGAGGCAAAAACCTTTCTCTTTCTGAACTCTCTCTTACCTGTGATAGTTGGCCTAGTAACAGCTCCTCTAGTTAGAGAAATTGAAGTCACAAGCCCAAAGTACTCTGGTGTTGGGTTTGCGGTGACGTTTGTTATAACAATTGCCACTGGAATATATGCTGTGTTGAGTAGCTTGCAATTTGTCACAAGCAAAATATCCTCATTGGGTATTCTTATTGGTATTCTAGTGTCTCTTCTCATCCCTCTTATAGTTCCACTTTCAGTGAAGATCAAGGAACTACAAGGGTCATGGCATAAAAATAGAGAAAAGCTAAGAGTATACCATTTTACTATGGAGGAGAATACTAATGAAGAGAGGGCAGAGAATGAGGTGAAAGAGGGTGAAGAGAGTAGAGATTCTTTTGAAGAAGAGTTTGGTATTATAGAAGAAATTGGAGTGAAGTTGATGCTAAGAAGAATAAATTTCTGGTTATATTTCTTTGTCTATTTTTTTGGTGCAACAATTGGTTTAGTATATCTTAATAACTTAGGACAAATAGCTGAATCCCGAGGTTGTTCTGGAACTTCATCTTTGGTGTCTTTATCTTCAGCATTTGGGTTCTTTGGCCGTCTCATGCCATCTCTTATGGACTACTTCTACAGGGGAAAGCATAGAATTTCAAGACCTGCTTCTATGTTGGCAGTGATGGTTCCAACATCAGGTGCATTCTTCTTACTTCTCAACAAAAGTAACCTTGCCCTTTACATAAGCACTGCTATAATTGGAGTGTGTACTGGGGCAATCACTTCCATTGCTGTTTCCACAACCACTGAGCTATTTGGCACAAAGCATTTCTCAGTGAACCATAATGTGGTGGTGGCCAACATTCCAATTGGGTCCTTTCTATTTGGCTATTCAGCTGCACTTATTTACCGTAAGGAAGGGCATGAACCTGACCATGGCAAATGCATGGGGATGGAATGTTACAAAAGCACTTTTGTCATATGGGGTTCCTTTTGTTTCCTTGGAACTTTTTTGGCTTTGATTCTACATGCAAGGACTCGCAAGCTTTACTCACAAAAACAATAG 1560 0.4038 MPSTTLQWLSLVAIIWLQAINGTNTNFPAYSSQLKQLLSISQMQLNNLAFASDAGKLFGWFSGLASVYLPLWLVLMIGSTLGLIGYGVQYLFITNQISSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFLPDRQVAVGITTSYQGLSAKIYTNIVDAVSPHKEAKTFLFLNSLLPVIVGLVTAPLVREIEVTSPKYSGVGFAVTFVITIATGIYAVLSSLQFVTSKISSLGILIGILVSLLIPLIVPLSVKIKELQGSWHKNREKLRVYHFTMEENTNEERAENEVKEGEESRDSFEEEFGIIEEIGVKLMLRRINFWLYFFVYFFGATIGLVYLNNLGQIAESRGCSGTSSLVSLSSAFGFFGRLMPSLMDYFYRGKHRISRPASMLAVMVPTSGAFFLLLNKSNLALYISTAIIGVCTGAITSIAVSTTTELFGTKHFSVNHNVVVANIPIGSFLFGYSAALIYRKEGHEPDHGKCMGMECYKSTFVIWGSFCFLGTFLALILHARTRKLYSQKQ* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1857 519 SUPERFAMILY MFS general substrate transporter 4 513 IPR036259 -
Apr10g1857 519 Coils Coil 281 301 - -
Apr10g1857 519 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 518 - -
Apr10g1857 519 Pfam Nodulin-like 7 249 IPR010658 -
Apr10g1857 519 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 518 - -
Apr10g1857 519 Gene3D MFS general substrate transporter like domains 191 511 IPR036259 -
Apr10g1857 519 CDD MFS_Mch1p_like 6 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1857 Apr-Chr10 31571209 31574554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1857 1 518 Nodulin-like Gene Family AT2G30300 50.379 2.29e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1857 - - gmx:100800763 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1857 10 31571209 31574554 Apr9g1196 9 21484139 21486119 PCT